Protein–RNA interactions for Protein: Q9Z2M6

Ubl3, Ubiquitin-like protein 3, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubl3Q9Z2M6 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ubl3Q9Z2M6 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ubl3Q9Z2M6 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ubl3Q9Z2M6 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ubl3Q9Z2M6 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ubl3Q9Z2M6 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ubl3Q9Z2M6 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ubl3Q9Z2M6 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ubl3Q9Z2M6 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ubl3Q9Z2M6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ubl3Q9Z2M6 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ubl3Q9Z2M6 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ubl3Q9Z2M6 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ubl3Q9Z2M6 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.31□□□□□ -0.12
Ubl3Q9Z2M6 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ubl3Q9Z2M6 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.31□□□□□ -0.12
Ubl3Q9Z2M6 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ubl3Q9Z2M6 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ubl3Q9Z2M6 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ubl3Q9Z2M6 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ubl3Q9Z2M6 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ubl3Q9Z2M6 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ubl3Q9Z2M6 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ubl3Q9Z2M6 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Ubl3Q9Z2M6 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ubl3Q9Z2M6 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ubl3Q9Z2M6 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ubl3Q9Z2M6 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ubl3Q9Z2M6 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ubl3Q9Z2M6 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ubl3Q9Z2M6 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ubl3Q9Z2M6 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ubl3Q9Z2M6 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ubl3Q9Z2M6 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ubl3Q9Z2M6 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ubl3Q9Z2M6 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ubl3Q9Z2M6 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ubl3Q9Z2M6 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ubl3Q9Z2M6 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ubl3Q9Z2M6 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ubl3Q9Z2M6 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ubl3Q9Z2M6 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Ubl3Q9Z2M6 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ubl3Q9Z2M6 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ubl3Q9Z2M6 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.3□□□□□ -0.12
Ubl3Q9Z2M6 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ubl3Q9Z2M6 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.3□□□□□ -0.12
Ubl3Q9Z2M6 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ubl3Q9Z2M6 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ubl3Q9Z2M6 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ubl3Q9Z2M6 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Ubl3Q9Z2M6 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ubl3Q9Z2M6 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ubl3Q9Z2M6 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Ubl3Q9Z2M6 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ubl3Q9Z2M6 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ubl3Q9Z2M6 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Ubl3Q9Z2M6 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ubl3Q9Z2M6 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ubl3Q9Z2M6 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ubl3Q9Z2M6 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ubl3Q9Z2M6 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.3□□□□□ -0.12
Ubl3Q9Z2M6 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ubl3Q9Z2M6 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ubl3Q9Z2M6 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ubl3Q9Z2M6 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ubl3Q9Z2M6 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ubl3Q9Z2M6 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ubl3Q9Z2M6 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ubl3Q9Z2M6 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.29□□□□□ -0.12
Ubl3Q9Z2M6 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ubl3Q9Z2M6 Gm11950-201ENSMUST00000121615 838 ntBASIC14.29□□□□□ -0.12
Ubl3Q9Z2M6 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Ubl3Q9Z2M6 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ubl3Q9Z2M6 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ubl3Q9Z2M6 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ubl3Q9Z2M6 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Ubl3Q9Z2M6 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ubl3Q9Z2M6 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ubl3Q9Z2M6 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.29□□□□□ -0.12
Ubl3Q9Z2M6 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ubl3Q9Z2M6 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
Ubl3Q9Z2M6 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ubl3Q9Z2M6 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ubl3Q9Z2M6 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ubl3Q9Z2M6 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ubl3Q9Z2M6 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ubl3Q9Z2M6 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ubl3Q9Z2M6 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ubl3Q9Z2M6 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ubl3Q9Z2M6 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ubl3Q9Z2M6 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubl3Q9Z2M6 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubl3Q9Z2M6 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ubl3Q9Z2M6 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.28□□□□□ -0.12
Ubl3Q9Z2M6 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ubl3Q9Z2M6 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubl3Q9Z2M6 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.28□□□□□ -0.12
Ubl3Q9Z2M6 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ubl3Q9Z2M6 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms