Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn13Q9Z0S4 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn13Q9Z0S4 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.33□□□□□ -0.12
Cldn13Q9Z0S4 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn13Q9Z0S4 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn13Q9Z0S4 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn13Q9Z0S4 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn13Q9Z0S4 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.32□□□□□ -0.12
Cldn13Q9Z0S4 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn13Q9Z0S4 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn13Q9Z0S4 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn13Q9Z0S4 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn13Q9Z0S4 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn13Q9Z0S4 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn13Q9Z0S4 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn13Q9Z0S4 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn13Q9Z0S4 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn13Q9Z0S4 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn13Q9Z0S4 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.32□□□□□ -0.12
Cldn13Q9Z0S4 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn13Q9Z0S4 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn13Q9Z0S4 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn13Q9Z0S4 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn13Q9Z0S4 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn13Q9Z0S4 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn13Q9Z0S4 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn13Q9Z0S4 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn13Q9Z0S4 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn13Q9Z0S4 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn13Q9Z0S4 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn13Q9Z0S4 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn13Q9Z0S4 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cldn13Q9Z0S4 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn13Q9Z0S4 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn13Q9Z0S4 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn13Q9Z0S4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn13Q9Z0S4 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn13Q9Z0S4 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Cldn13Q9Z0S4 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn13Q9Z0S4 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.31□□□□□ -0.12
Cldn13Q9Z0S4 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn13Q9Z0S4 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn13Q9Z0S4 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.31□□□□□ -0.12
Cldn13Q9Z0S4 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn13Q9Z0S4 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn13Q9Z0S4 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn13Q9Z0S4 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn13Q9Z0S4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn13Q9Z0S4 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.31□□□□□ -0.12
Cldn13Q9Z0S4 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Cldn13Q9Z0S4 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn13Q9Z0S4 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn13Q9Z0S4 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn13Q9Z0S4 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.31□□□□□ -0.12
Cldn13Q9Z0S4 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.31□□□□□ -0.12
Cldn13Q9Z0S4 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn13Q9Z0S4 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cldn13Q9Z0S4 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn13Q9Z0S4 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Cldn13Q9Z0S4 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn13Q9Z0S4 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.31□□□□□ -0.12
Cldn13Q9Z0S4 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cldn13Q9Z0S4 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn13Q9Z0S4 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cldn13Q9Z0S4 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Cldn13Q9Z0S4 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn13Q9Z0S4 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cldn13Q9Z0S4 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cldn13Q9Z0S4 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.3□□□□□ -0.12
Cldn13Q9Z0S4 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.3□□□□□ -0.12
Cldn13Q9Z0S4 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn13Q9Z0S4 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cldn13Q9Z0S4 Gm27742-201ENSMUST00000184667 60 ntBASIC14.3□□□□□ -0.12
Cldn13Q9Z0S4 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Cldn13Q9Z0S4 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn13Q9Z0S4 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn13Q9Z0S4 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn13Q9Z0S4 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn13Q9Z0S4 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn13Q9Z0S4 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn13Q9Z0S4 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn13Q9Z0S4 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Cldn13Q9Z0S4 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn13Q9Z0S4 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn13Q9Z0S4 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn13Q9Z0S4 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Cldn13Q9Z0S4 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cldn13Q9Z0S4 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn13Q9Z0S4 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn13Q9Z0S4 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn13Q9Z0S4 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn13Q9Z0S4 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn13Q9Z0S4 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn13Q9Z0S4 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn13Q9Z0S4 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn13Q9Z0S4 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn13Q9Z0S4 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn13Q9Z0S4 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn13Q9Z0S4 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn13Q9Z0S4 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms