Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.6■□□□□ 0.25
Smarcb1Q9Z0H3 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcb1Q9Z0H3 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcb1Q9Z0H3 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcb1Q9Z0H3 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Smarcb1Q9Z0H3 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcb1Q9Z0H3 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcb1Q9Z0H3 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcb1Q9Z0H3 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Smarcb1Q9Z0H3 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Smarcb1Q9Z0H3 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcb1Q9Z0H3 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Smarcb1Q9Z0H3 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcb1Q9Z0H3 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcb1Q9Z0H3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcb1Q9Z0H3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.59■□□□□ 0.25
Smarcb1Q9Z0H3 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcb1Q9Z0H3 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.59■□□□□ 0.25
Smarcb1Q9Z0H3 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcb1Q9Z0H3 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcb1Q9Z0H3 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.59■□□□□ 0.25
Smarcb1Q9Z0H3 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.59■□□□□ 0.25
Smarcb1Q9Z0H3 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Smarcb1Q9Z0H3 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcb1Q9Z0H3 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Smarcb1Q9Z0H3 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcb1Q9Z0H3 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcb1Q9Z0H3 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Smarcb1Q9Z0H3 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcb1Q9Z0H3 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcb1Q9Z0H3 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcb1Q9Z0H3 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Smarcb1Q9Z0H3 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smarcb1Q9Z0H3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smarcb1Q9Z0H3 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smarcb1Q9Z0H3 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Smarcb1Q9Z0H3 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcb1Q9Z0H3 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcb1Q9Z0H3 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.58■□□□□ 0.24
Smarcb1Q9Z0H3 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcb1Q9Z0H3 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Smarcb1Q9Z0H3 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcb1Q9Z0H3 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcb1Q9Z0H3 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcb1Q9Z0H3 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcb1Q9Z0H3 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcb1Q9Z0H3 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcb1Q9Z0H3 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcb1Q9Z0H3 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcb1Q9Z0H3 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcb1Q9Z0H3 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcb1Q9Z0H3 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcb1Q9Z0H3 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.57■□□□□ 0.24
Smarcb1Q9Z0H3 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcb1Q9Z0H3 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcb1Q9Z0H3 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Smarcb1Q9Z0H3 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcb1Q9Z0H3 Gm11764-201ENSMUST00000120221 623 ntBASIC16.57■□□□□ 0.24
Smarcb1Q9Z0H3 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.57■□□□□ 0.24
Smarcb1Q9Z0H3 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.57■□□□□ 0.24
Smarcb1Q9Z0H3 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
Smarcb1Q9Z0H3 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcb1Q9Z0H3 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.57■□□□□ 0.24
Smarcb1Q9Z0H3 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.57■□□□□ 0.24
Smarcb1Q9Z0H3 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcb1Q9Z0H3 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Smarcb1Q9Z0H3 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcb1Q9Z0H3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcb1Q9Z0H3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Smarcb1Q9Z0H3 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcb1Q9Z0H3 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Smarcb1Q9Z0H3 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcb1Q9Z0H3 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcb1Q9Z0H3 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Smarcb1Q9Z0H3 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcb1Q9Z0H3 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Smarcb1Q9Z0H3 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smarcb1Q9Z0H3 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smarcb1Q9Z0H3 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smarcb1Q9Z0H3 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Smarcb1Q9Z0H3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Smarcb1Q9Z0H3 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Smarcb1Q9Z0H3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smarcb1Q9Z0H3 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smarcb1Q9Z0H3 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smarcb1Q9Z0H3 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.56■□□□□ 0.24
Smarcb1Q9Z0H3 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.56■□□□□ 0.24
Smarcb1Q9Z0H3 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smarcb1Q9Z0H3 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.56■□□□□ 0.24
Smarcb1Q9Z0H3 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smarcb1Q9Z0H3 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.56■□□□□ 0.24
Smarcb1Q9Z0H3 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smarcb1Q9Z0H3 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Smarcb1Q9Z0H3 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smarcb1Q9Z0H3 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Smarcb1Q9Z0H3 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.56■□□□□ 0.24
Smarcb1Q9Z0H3 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smarcb1Q9Z0H3 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smarcb1Q9Z0H3 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Smarcb1Q9Z0H3 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms