Protein–RNA interactions for Protein: Q9QUK3

Cln8, Protein CLN8, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln8Q9QUK3 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cln8Q9QUK3 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cln8Q9QUK3 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cln8Q9QUK3 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.43□□□□□ -0.1
Cln8Q9QUK3 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cln8Q9QUK3 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cln8Q9QUK3 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cln8Q9QUK3 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cln8Q9QUK3 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cln8Q9QUK3 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cln8Q9QUK3 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cln8Q9QUK3 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cln8Q9QUK3 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cln8Q9QUK3 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cln8Q9QUK3 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cln8Q9QUK3 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cln8Q9QUK3 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cln8Q9QUK3 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cln8Q9QUK3 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.42□□□□□ -0.1
Cln8Q9QUK3 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cln8Q9QUK3 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.42□□□□□ -0.1
Cln8Q9QUK3 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cln8Q9QUK3 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.42□□□□□ -0.1
Cln8Q9QUK3 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cln8Q9QUK3 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cln8Q9QUK3 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cln8Q9QUK3 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cln8Q9QUK3 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cln8Q9QUK3 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.42□□□□□ -0.1
Cln8Q9QUK3 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cln8Q9QUK3 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cln8Q9QUK3 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cln8Q9QUK3 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cln8Q9QUK3 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.42□□□□□ -0.1
Cln8Q9QUK3 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.42□□□□□ -0.1
Cln8Q9QUK3 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cln8Q9QUK3 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cln8Q9QUK3 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cln8Q9QUK3 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cln8Q9QUK3 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cln8Q9QUK3 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cln8Q9QUK3 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cln8Q9QUK3 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cln8Q9QUK3 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.41□□□□□ -0.1
Cln8Q9QUK3 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cln8Q9QUK3 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cln8Q9QUK3 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cln8Q9QUK3 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cln8Q9QUK3 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cln8Q9QUK3 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cln8Q9QUK3 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cln8Q9QUK3 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cln8Q9QUK3 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cln8Q9QUK3 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cln8Q9QUK3 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cln8Q9QUK3 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cln8Q9QUK3 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Cln8Q9QUK3 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cln8Q9QUK3 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cln8Q9QUK3 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cln8Q9QUK3 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.41□□□□□ -0.1
Cln8Q9QUK3 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.41□□□□□ -0.1
Cln8Q9QUK3 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.41□□□□□ -0.1
Cln8Q9QUK3 Gm21362-201ENSMUST00000194272 928 ntBASIC14.41□□□□□ -0.1
Cln8Q9QUK3 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.41□□□□□ -0.1
Cln8Q9QUK3 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cln8Q9QUK3 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cln8Q9QUK3 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cln8Q9QUK3 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cln8Q9QUK3 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cln8Q9QUK3 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cln8Q9QUK3 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cln8Q9QUK3 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cln8Q9QUK3 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cln8Q9QUK3 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cln8Q9QUK3 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cln8Q9QUK3 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Cln8Q9QUK3 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cln8Q9QUK3 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cln8Q9QUK3 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cln8Q9QUK3 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cln8Q9QUK3 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cln8Q9QUK3 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cln8Q9QUK3 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.4□□□□□ -0.1
Cln8Q9QUK3 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.4□□□□□ -0.1
Cln8Q9QUK3 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.4□□□□□ -0.1
Cln8Q9QUK3 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cln8Q9QUK3 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cln8Q9QUK3 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cln8Q9QUK3 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cln8Q9QUK3 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cln8Q9QUK3 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cln8Q9QUK3 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cln8Q9QUK3 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Cln8Q9QUK3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cln8Q9QUK3 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cln8Q9QUK3 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.4□□□□□ -0.1
Cln8Q9QUK3 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cln8Q9QUK3 Mir6404-201ENSMUST00000183699 94 ntBASIC14.4□□□□□ -0.1
Cln8Q9QUK3 Gm17807-201ENSMUST00000186869 298 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms