Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sec61a2Q9JLR1 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sec61a2Q9JLR1 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sec61a2Q9JLR1 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sec61a2Q9JLR1 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sec61a2Q9JLR1 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sec61a2Q9JLR1 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.48□□□□□ -0.09
Sec61a2Q9JLR1 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sec61a2Q9JLR1 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sec61a2Q9JLR1 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sec61a2Q9JLR1 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sec61a2Q9JLR1 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sec61a2Q9JLR1 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sec61a2Q9JLR1 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sec61a2Q9JLR1 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sec61a2Q9JLR1 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Sec61a2Q9JLR1 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sec61a2Q9JLR1 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Sec61a2Q9JLR1 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sec61a2Q9JLR1 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.47□□□□□ -0.09
Sec61a2Q9JLR1 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sec61a2Q9JLR1 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sec61a2Q9JLR1 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Sec61a2Q9JLR1 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sec61a2Q9JLR1 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Sec61a2Q9JLR1 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.47□□□□□ -0.09
Sec61a2Q9JLR1 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sec61a2Q9JLR1 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sec61a2Q9JLR1 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Sec61a2Q9JLR1 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sec61a2Q9JLR1 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sec61a2Q9JLR1 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sec61a2Q9JLR1 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Sec61a2Q9JLR1 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sec61a2Q9JLR1 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Sec61a2Q9JLR1 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Sec61a2Q9JLR1 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sec61a2Q9JLR1 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.47□□□□□ -0.09
Sec61a2Q9JLR1 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sec61a2Q9JLR1 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sec61a2Q9JLR1 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sec61a2Q9JLR1 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sec61a2Q9JLR1 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sec61a2Q9JLR1 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sec61a2Q9JLR1 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sec61a2Q9JLR1 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Sec61a2Q9JLR1 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sec61a2Q9JLR1 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sec61a2Q9JLR1 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sec61a2Q9JLR1 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sec61a2Q9JLR1 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sec61a2Q9JLR1 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.46□□□□□ -0.09
Sec61a2Q9JLR1 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.46□□□□□ -0.09
Sec61a2Q9JLR1 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sec61a2Q9JLR1 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Sec61a2Q9JLR1 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.46□□□□□ -0.09
Sec61a2Q9JLR1 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sec61a2Q9JLR1 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sec61a2Q9JLR1 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sec61a2Q9JLR1 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sec61a2Q9JLR1 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sec61a2Q9JLR1 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sec61a2Q9JLR1 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sec61a2Q9JLR1 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sec61a2Q9JLR1 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Sec61a2Q9JLR1 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sec61a2Q9JLR1 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sec61a2Q9JLR1 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sec61a2Q9JLR1 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sec61a2Q9JLR1 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sec61a2Q9JLR1 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sec61a2Q9JLR1 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sec61a2Q9JLR1 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sec61a2Q9JLR1 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sec61a2Q9JLR1 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sec61a2Q9JLR1 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sec61a2Q9JLR1 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sec61a2Q9JLR1 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sec61a2Q9JLR1 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sec61a2Q9JLR1 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sec61a2Q9JLR1 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sec61a2Q9JLR1 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sec61a2Q9JLR1 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.45□□□□□ -0.1
Sec61a2Q9JLR1 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.45□□□□□ -0.1
Sec61a2Q9JLR1 Gm29707-201ENSMUST00000196325 491 ntBASIC14.45□□□□□ -0.1
Sec61a2Q9JLR1 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sec61a2Q9JLR1 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sec61a2Q9JLR1 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sec61a2Q9JLR1 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sec61a2Q9JLR1 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sec61a2Q9JLR1 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sec61a2Q9JLR1 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sec61a2Q9JLR1 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sec61a2Q9JLR1 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sec61a2Q9JLR1 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Sec61a2Q9JLR1 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sec61a2Q9JLR1 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sec61a2Q9JLR1 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sec61a2Q9JLR1 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sec61a2Q9JLR1 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms