Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smco4Q9JIS3 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smco4Q9JIS3 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Smco4Q9JIS3 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smco4Q9JIS3 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Smco4Q9JIS3 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smco4Q9JIS3 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Smco4Q9JIS3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.96□□□□□ -0.33
Smco4Q9JIS3 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smco4Q9JIS3 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smco4Q9JIS3 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smco4Q9JIS3 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Smco4Q9JIS3 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smco4Q9JIS3 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Smco4Q9JIS3 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smco4Q9JIS3 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Smco4Q9JIS3 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Smco4Q9JIS3 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Smco4Q9JIS3 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smco4Q9JIS3 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Smco4Q9JIS3 Gm12251-201ENSMUST00000117893 792 ntBASIC12.96□□□□□ -0.33
Smco4Q9JIS3 Gm12922-201ENSMUST00000120626 809 ntBASIC12.96□□□□□ -0.33
Smco4Q9JIS3 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC12.96□□□□□ -0.33
Smco4Q9JIS3 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smco4Q9JIS3 Gm9847-201ENSMUST00000052528 599 ntBASIC12.96□□□□□ -0.33
Smco4Q9JIS3 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smco4Q9JIS3 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smco4Q9JIS3 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Smco4Q9JIS3 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smco4Q9JIS3 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Smco4Q9JIS3 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Smco4Q9JIS3 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Smco4Q9JIS3 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smco4Q9JIS3 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smco4Q9JIS3 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC12.96□□□□□ -0.34
Smco4Q9JIS3 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smco4Q9JIS3 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Smco4Q9JIS3 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Smco4Q9JIS3 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smco4Q9JIS3 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smco4Q9JIS3 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.95□□□□□ -0.34
Smco4Q9JIS3 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco4Q9JIS3 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.95□□□□□ -0.34
Smco4Q9JIS3 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Smco4Q9JIS3 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco4Q9JIS3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco4Q9JIS3 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco4Q9JIS3 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.95□□□□□ -0.34
Smco4Q9JIS3 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.95□□□□□ -0.34
Smco4Q9JIS3 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Smco4Q9JIS3 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Smco4Q9JIS3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC12.95□□□□□ -0.34
Smco4Q9JIS3 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smco4Q9JIS3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco4Q9JIS3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Smco4Q9JIS3 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco4Q9JIS3 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC12.95□□□□□ -0.34
Smco4Q9JIS3 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco4Q9JIS3 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Smco4Q9JIS3 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco4Q9JIS3 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco4Q9JIS3 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco4Q9JIS3 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco4Q9JIS3 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco4Q9JIS3 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco4Q9JIS3 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco4Q9JIS3 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco4Q9JIS3 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC12.95□□□□□ -0.34
Smco4Q9JIS3 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco4Q9JIS3 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smco4Q9JIS3 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco4Q9JIS3 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.95□□□□□ -0.34
Smco4Q9JIS3 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Smco4Q9JIS3 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.95□□□□□ -0.34
Smco4Q9JIS3 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Smco4Q9JIS3 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Smco4Q9JIS3 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Smco4Q9JIS3 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.94□□□□□ -0.34
Smco4Q9JIS3 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smco4Q9JIS3 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Smco4Q9JIS3 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smco4Q9JIS3 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smco4Q9JIS3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smco4Q9JIS3 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smco4Q9JIS3 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Smco4Q9JIS3 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Smco4Q9JIS3 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smco4Q9JIS3 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC12.94□□□□□ -0.34
Smco4Q9JIS3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smco4Q9JIS3 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smco4Q9JIS3 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smco4Q9JIS3 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smco4Q9JIS3 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Smco4Q9JIS3 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smco4Q9JIS3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smco4Q9JIS3 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smco4Q9JIS3 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smco4Q9JIS3 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smco4Q9JIS3 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Smco4Q9JIS3 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms