Protein–RNA interactions for Protein: Q9JIF7

Copb1, Coatomer subunit beta, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1Q9JIF7 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
Copb1Q9JIF7 Gm45058-201ENSMUST00000205810 766 ntBASIC17.59■□□□□ 0.41
Copb1Q9JIF7 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.59■□□□□ 0.41
Copb1Q9JIF7 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.59■□□□□ 0.41
Copb1Q9JIF7 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.59■□□□□ 0.41
Copb1Q9JIF7 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Copb1Q9JIF7 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Copb1Q9JIF7 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Copb1Q9JIF7 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Copb1Q9JIF7 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Copb1Q9JIF7 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Copb1Q9JIF7 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Copb1Q9JIF7 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Copb1Q9JIF7 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Copb1Q9JIF7 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
Copb1Q9JIF7 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.58■□□□□ 0.41
Copb1Q9JIF7 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
Copb1Q9JIF7 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Copb1Q9JIF7 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Copb1Q9JIF7 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Copb1Q9JIF7 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Copb1Q9JIF7 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.58■□□□□ 0.4
Copb1Q9JIF7 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Copb1Q9JIF7 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Copb1Q9JIF7 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Copb1Q9JIF7 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.58■□□□□ 0.4
Copb1Q9JIF7 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Copb1Q9JIF7 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Copb1Q9JIF7 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.58■□□□□ 0.4
Copb1Q9JIF7 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Copb1Q9JIF7 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Copb1Q9JIF7 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Copb1Q9JIF7 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
Copb1Q9JIF7 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Copb1Q9JIF7 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Copb1Q9JIF7 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Copb1Q9JIF7 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Copb1Q9JIF7 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Copb1Q9JIF7 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Copb1Q9JIF7 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.57■□□□□ 0.4
Copb1Q9JIF7 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Copb1Q9JIF7 Gm10252-201ENSMUST00000209541 832 ntBASIC17.57■□□□□ 0.4
Copb1Q9JIF7 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.57■□□□□ 0.4
Copb1Q9JIF7 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Copb1Q9JIF7 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Copb1Q9JIF7 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Copb1Q9JIF7 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.57■□□□□ 0.4
Copb1Q9JIF7 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Copb1Q9JIF7 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Copb1Q9JIF7 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.57■□□□□ 0.4
Copb1Q9JIF7 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Copb1Q9JIF7 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Copb1Q9JIF7 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Copb1Q9JIF7 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Copb1Q9JIF7 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Copb1Q9JIF7 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Copb1Q9JIF7 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Copb1Q9JIF7 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
Copb1Q9JIF7 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Copb1Q9JIF7 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Copb1Q9JIF7 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.56■□□□□ 0.4
Copb1Q9JIF7 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Copb1Q9JIF7 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Copb1Q9JIF7 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Copb1Q9JIF7 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Copb1Q9JIF7 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Copb1Q9JIF7 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Copb1Q9JIF7 Gm43799-201ENSMUST00000201845 579 ntBASIC17.56■□□□□ 0.4
Copb1Q9JIF7 Gm18959-201ENSMUST00000208954 655 ntBASIC17.56■□□□□ 0.4
Copb1Q9JIF7 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Copb1Q9JIF7 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Copb1Q9JIF7 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Copb1Q9JIF7 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Copb1Q9JIF7 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Copb1Q9JIF7 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Copb1Q9JIF7 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.56■□□□□ 0.4
Copb1Q9JIF7 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Copb1Q9JIF7 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Copb1Q9JIF7 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Copb1Q9JIF7 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Copb1Q9JIF7 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Copb1Q9JIF7 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Copb1Q9JIF7 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Copb1Q9JIF7 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Copb1Q9JIF7 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.55■□□□□ 0.4
Copb1Q9JIF7 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Copb1Q9JIF7 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.55■□□□□ 0.4
Copb1Q9JIF7 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Copb1Q9JIF7 Gm37722-201ENSMUST00000193757 208 ntBASIC17.55■□□□□ 0.4
Copb1Q9JIF7 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Copb1Q9JIF7 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Copb1Q9JIF7 Asic1-205ENSMUST00000228185 1818 ntBASIC17.55■□□□□ 0.4
Copb1Q9JIF7 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Copb1Q9JIF7 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Copb1Q9JIF7 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Copb1Q9JIF7 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Copb1Q9JIF7 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.55■□□□□ 0.4
Copb1Q9JIF7 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Copb1Q9JIF7 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Copb1Q9JIF7 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms