Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn3Q9ES97 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn3Q9ES97 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn3Q9ES97 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn3Q9ES97 Mir770-201ENSMUST00000103252 94 ntBASIC17.11■□□□□ 0.33
Rtn3Q9ES97 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn3Q9ES97 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Rtn3Q9ES97 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn3Q9ES97 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn3Q9ES97 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn3Q9ES97 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn3Q9ES97 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn3Q9ES97 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn3Q9ES97 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn3Q9ES97 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn3Q9ES97 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn3Q9ES97 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn3Q9ES97 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Rtn3Q9ES97 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn3Q9ES97 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Rtn3Q9ES97 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.11■□□□□ 0.33
Rtn3Q9ES97 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.1■□□□□ 0.33
Rtn3Q9ES97 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn3Q9ES97 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Rtn3Q9ES97 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.1■□□□□ 0.33
Rtn3Q9ES97 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn3Q9ES97 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn3Q9ES97 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn3Q9ES97 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn3Q9ES97 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn3Q9ES97 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.1■□□□□ 0.33
Rtn3Q9ES97 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.1■□□□□ 0.33
Rtn3Q9ES97 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn3Q9ES97 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn3Q9ES97 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn3Q9ES97 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn3Q9ES97 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn3Q9ES97 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn3Q9ES97 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn3Q9ES97 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn3Q9ES97 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn3Q9ES97 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.1■□□□□ 0.33
Rtn3Q9ES97 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn3Q9ES97 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Rtn3Q9ES97 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn3Q9ES97 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn3Q9ES97 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rtn3Q9ES97 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtn3Q9ES97 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Rtn3Q9ES97 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtn3Q9ES97 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rtn3Q9ES97 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtn3Q9ES97 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.09■□□□□ 0.33
Rtn3Q9ES97 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.09■□□□□ 0.33
Rtn3Q9ES97 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.09■□□□□ 0.33
Rtn3Q9ES97 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtn3Q9ES97 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Rtn3Q9ES97 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.09■□□□□ 0.33
Rtn3Q9ES97 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtn3Q9ES97 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtn3Q9ES97 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtn3Q9ES97 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rtn3Q9ES97 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtn3Q9ES97 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtn3Q9ES97 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtn3Q9ES97 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.08■□□□□ 0.33
Rtn3Q9ES97 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.08■□□□□ 0.33
Rtn3Q9ES97 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rtn3Q9ES97 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.08■□□□□ 0.33
Rtn3Q9ES97 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rtn3Q9ES97 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Rtn3Q9ES97 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Rtn3Q9ES97 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rtn3Q9ES97 Gm17807-201ENSMUST00000186869 298 ntBASIC17.08■□□□□ 0.32
Rtn3Q9ES97 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.08■□□□□ 0.32
Rtn3Q9ES97 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rtn3Q9ES97 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rtn3Q9ES97 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rtn3Q9ES97 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rtn3Q9ES97 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rtn3Q9ES97 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Rtn3Q9ES97 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Rtn3Q9ES97 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rtn3Q9ES97 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rtn3Q9ES97 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.07■□□□□ 0.32
Rtn3Q9ES97 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtn3Q9ES97 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtn3Q9ES97 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtn3Q9ES97 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rtn3Q9ES97 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtn3Q9ES97 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Rtn3Q9ES97 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtn3Q9ES97 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.07■□□□□ 0.32
Rtn3Q9ES97 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtn3Q9ES97 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtn3Q9ES97 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rtn3Q9ES97 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtn3Q9ES97 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Rtn3Q9ES97 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtn3Q9ES97 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms