Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.75■□□□□ 0.27
Chmp2aQ9DB34 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp2aQ9DB34 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp2aQ9DB34 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp2aQ9DB34 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp2aQ9DB34 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp2aQ9DB34 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp2aQ9DB34 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp2aQ9DB34 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp2aQ9DB34 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Chmp2aQ9DB34 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp2aQ9DB34 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Chmp2aQ9DB34 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp2aQ9DB34 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp2aQ9DB34 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp2aQ9DB34 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.74■□□□□ 0.27
Chmp2aQ9DB34 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.74■□□□□ 0.27
Chmp2aQ9DB34 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.74■□□□□ 0.27
Chmp2aQ9DB34 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp2aQ9DB34 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
Chmp2aQ9DB34 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp2aQ9DB34 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp2aQ9DB34 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp2aQ9DB34 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp2aQ9DB34 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp2aQ9DB34 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp2aQ9DB34 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp2aQ9DB34 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp2aQ9DB34 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp2aQ9DB34 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp2aQ9DB34 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Chmp2aQ9DB34 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp2aQ9DB34 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp2aQ9DB34 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Chmp2aQ9DB34 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.73■□□□□ 0.27
Chmp2aQ9DB34 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Chmp2aQ9DB34 Gm9103-201ENSMUST00000119371 405 ntBASIC16.73■□□□□ 0.27
Chmp2aQ9DB34 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp2aQ9DB34 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.73■□□□□ 0.27
Chmp2aQ9DB34 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp2aQ9DB34 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Chmp2aQ9DB34 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp2aQ9DB34 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp2aQ9DB34 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp2aQ9DB34 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp2aQ9DB34 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp2aQ9DB34 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp2aQ9DB34 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp2aQ9DB34 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp2aQ9DB34 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp2aQ9DB34 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp2aQ9DB34 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Chmp2aQ9DB34 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Chmp2aQ9DB34 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp2aQ9DB34 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp2aQ9DB34 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp2aQ9DB34 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Chmp2aQ9DB34 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp2aQ9DB34 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.72■□□□□ 0.27
Chmp2aQ9DB34 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp2aQ9DB34 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp2aQ9DB34 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.72■□□□□ 0.27
Chmp2aQ9DB34 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Chmp2aQ9DB34 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.72■□□□□ 0.27
Chmp2aQ9DB34 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
Chmp2aQ9DB34 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Chmp2aQ9DB34 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp2aQ9DB34 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp2aQ9DB34 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.72■□□□□ 0.27
Chmp2aQ9DB34 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.72■□□□□ 0.27
Chmp2aQ9DB34 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp2aQ9DB34 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp2aQ9DB34 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp2aQ9DB34 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp2aQ9DB34 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp2aQ9DB34 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp2aQ9DB34 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp2aQ9DB34 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp2aQ9DB34 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.71■□□□□ 0.27
Chmp2aQ9DB34 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp2aQ9DB34 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp2aQ9DB34 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp2aQ9DB34 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.71■□□□□ 0.27
Chmp2aQ9DB34 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp2aQ9DB34 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp2aQ9DB34 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp2aQ9DB34 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
Chmp2aQ9DB34 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp2aQ9DB34 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp2aQ9DB34 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp2aQ9DB34 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp2aQ9DB34 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.71■□□□□ 0.27
Chmp2aQ9DB34 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp2aQ9DB34 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.71■□□□□ 0.27
Chmp2aQ9DB34 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp2aQ9DB34 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp2aQ9DB34 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp2aQ9DB34 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp2aQ9DB34 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp2aQ9DB34 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms