Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.23■□□□□ 0.67
Chmp4cQ9D7F7 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp4cQ9D7F7 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp4cQ9D7F7 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp4cQ9D7F7 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp4cQ9D7F7 Gm9867-201ENSMUST00000192212 2647 ntBASIC19.23■□□□□ 0.67
Chmp4cQ9D7F7 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp4cQ9D7F7 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp4cQ9D7F7 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp4cQ9D7F7 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp4cQ9D7F7 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp4cQ9D7F7 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp4cQ9D7F7 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Chmp4cQ9D7F7 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC19.23■□□□□ 0.67
Chmp4cQ9D7F7 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Chmp4cQ9D7F7 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp4cQ9D7F7 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp4cQ9D7F7 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp4cQ9D7F7 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp4cQ9D7F7 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC19.22■□□□□ 0.67
Chmp4cQ9D7F7 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC19.22■□□□□ 0.67
Chmp4cQ9D7F7 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp4cQ9D7F7 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp4cQ9D7F7 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp4cQ9D7F7 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp4cQ9D7F7 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp4cQ9D7F7 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp4cQ9D7F7 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp4cQ9D7F7 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp4cQ9D7F7 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.22■□□□□ 0.67
Chmp4cQ9D7F7 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Chmp4cQ9D7F7 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.22■□□□□ 0.67
Chmp4cQ9D7F7 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
Chmp4cQ9D7F7 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Chmp4cQ9D7F7 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp4cQ9D7F7 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp4cQ9D7F7 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp4cQ9D7F7 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Chmp4cQ9D7F7 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp4cQ9D7F7 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp4cQ9D7F7 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp4cQ9D7F7 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp4cQ9D7F7 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp4cQ9D7F7 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp4cQ9D7F7 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Chmp4cQ9D7F7 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.21■□□□□ 0.67
Chmp4cQ9D7F7 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp4cQ9D7F7 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.21■□□□□ 0.67
Chmp4cQ9D7F7 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.21■□□□□ 0.67
Chmp4cQ9D7F7 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.21■□□□□ 0.67
Chmp4cQ9D7F7 Gm45058-201ENSMUST00000205810 766 ntBASIC19.21■□□□□ 0.67
Chmp4cQ9D7F7 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.21■□□□□ 0.67
Chmp4cQ9D7F7 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp4cQ9D7F7 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Chmp4cQ9D7F7 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Chmp4cQ9D7F7 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Chmp4cQ9D7F7 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.21■□□□□ 0.67
Chmp4cQ9D7F7 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp4cQ9D7F7 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Chmp4cQ9D7F7 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp4cQ9D7F7 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp4cQ9D7F7 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp4cQ9D7F7 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp4cQ9D7F7 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp4cQ9D7F7 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp4cQ9D7F7 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp4cQ9D7F7 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp4cQ9D7F7 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp4cQ9D7F7 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Chmp4cQ9D7F7 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp4cQ9D7F7 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.2■□□□□ 0.66
Chmp4cQ9D7F7 Gm43598-201ENSMUST00000202482 2479 ntBASIC19.2■□□□□ 0.66
Chmp4cQ9D7F7 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp4cQ9D7F7 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp4cQ9D7F7 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp4cQ9D7F7 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp4cQ9D7F7 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp4cQ9D7F7 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp4cQ9D7F7 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp4cQ9D7F7 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Chmp4cQ9D7F7 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Chmp4cQ9D7F7 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp4cQ9D7F7 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp4cQ9D7F7 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp4cQ9D7F7 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp4cQ9D7F7 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Chmp4cQ9D7F7 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp4cQ9D7F7 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC19.19■□□□□ 0.66
Chmp4cQ9D7F7 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC19.19■□□□□ 0.66
Chmp4cQ9D7F7 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp4cQ9D7F7 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp4cQ9D7F7 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Chmp4cQ9D7F7 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC19.19■□□□□ 0.66
Chmp4cQ9D7F7 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp4cQ9D7F7 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp4cQ9D7F7 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp4cQ9D7F7 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp4cQ9D7F7 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp4cQ9D7F7 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp4cQ9D7F7 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms