Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Upk1aQ9D132 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Upk1aQ9D132 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.22■□□□□ 0.03
Upk1aQ9D132 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk1aQ9D132 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Upk1aQ9D132 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk1aQ9D132 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk1aQ9D132 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk1aQ9D132 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk1aQ9D132 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk1aQ9D132 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Upk1aQ9D132 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC15.22■□□□□ 0.03
Upk1aQ9D132 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.22■□□□□ 0.03
Upk1aQ9D132 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.22■□□□□ 0.03
Upk1aQ9D132 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.22■□□□□ 0.03
Upk1aQ9D132 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk1aQ9D132 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk1aQ9D132 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk1aQ9D132 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk1aQ9D132 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk1aQ9D132 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Upk1aQ9D132 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk1aQ9D132 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk1aQ9D132 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk1aQ9D132 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Upk1aQ9D132 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.22■□□□□ 0.03
Upk1aQ9D132 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk1aQ9D132 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Upk1aQ9D132 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Upk1aQ9D132 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.22■□□□□ 0.03
Upk1aQ9D132 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Upk1aQ9D132 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk1aQ9D132 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Upk1aQ9D132 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Upk1aQ9D132 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Upk1aQ9D132 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Upk1aQ9D132 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Upk1aQ9D132 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.21■□□□□ 0.03
Upk1aQ9D132 Gm11539-201ENSMUST00000119837 557 ntBASIC15.21■□□□□ 0.03
Upk1aQ9D132 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.21■□□□□ 0.03
Upk1aQ9D132 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Upk1aQ9D132 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.21■□□□□ 0.03
Upk1aQ9D132 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Upk1aQ9D132 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Upk1aQ9D132 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Upk1aQ9D132 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Upk1aQ9D132 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Upk1aQ9D132 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Upk1aQ9D132 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk1aQ9D132 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk1aQ9D132 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Upk1aQ9D132 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk1aQ9D132 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.2■□□□□ 0.02
Upk1aQ9D132 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Upk1aQ9D132 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.2■□□□□ 0.02
Upk1aQ9D132 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk1aQ9D132 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk1aQ9D132 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk1aQ9D132 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.2■□□□□ 0.02
Upk1aQ9D132 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Upk1aQ9D132 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk1aQ9D132 Gm22240-201ENSMUST00000175225 82 ntBASIC15.2■□□□□ 0.02
Upk1aQ9D132 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Upk1aQ9D132 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.2■□□□□ 0.02
Upk1aQ9D132 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk1aQ9D132 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk1aQ9D132 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk1aQ9D132 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Upk1aQ9D132 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk1aQ9D132 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Upk1aQ9D132 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk1aQ9D132 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk1aQ9D132 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk1aQ9D132 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Upk1aQ9D132 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.2■□□□□ 0.02
Upk1aQ9D132 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk1aQ9D132 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk1aQ9D132 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk1aQ9D132 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.19■□□□□ 0.02
Upk1aQ9D132 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Upk1aQ9D132 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Upk1aQ9D132 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Upk1aQ9D132 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Upk1aQ9D132 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Upk1aQ9D132 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Upk1aQ9D132 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Upk1aQ9D132 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Upk1aQ9D132 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Upk1aQ9D132 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Upk1aQ9D132 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Upk1aQ9D132 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Upk1aQ9D132 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Upk1aQ9D132 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Upk1aQ9D132 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Upk1aQ9D132 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Upk1aQ9D132 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Upk1aQ9D132 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Upk1aQ9D132 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Upk1aQ9D132 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Upk1aQ9D132 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms