Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Chaf1bQ9D0N7 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chaf1bQ9D0N7 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
Chaf1bQ9D0N7 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.14■□□□□ 0.01
Chaf1bQ9D0N7 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Chaf1bQ9D0N7 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chaf1bQ9D0N7 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chaf1bQ9D0N7 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chaf1bQ9D0N7 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chaf1bQ9D0N7 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chaf1bQ9D0N7 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chaf1bQ9D0N7 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chaf1bQ9D0N7 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chaf1bQ9D0N7 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chaf1bQ9D0N7 Gm10698-201ENSMUST00000182663 604 ntBASIC15.13■□□□□ 0.01
Chaf1bQ9D0N7 Gm5297-201ENSMUST00000198555 1171 ntBASIC15.13■□□□□ 0.01
Chaf1bQ9D0N7 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.13■□□□□ 0.01
Chaf1bQ9D0N7 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.13■□□□□ 0.01
Chaf1bQ9D0N7 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chaf1bQ9D0N7 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Chaf1bQ9D0N7 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Chaf1bQ9D0N7 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chaf1bQ9D0N7 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Chaf1bQ9D0N7 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chaf1bQ9D0N7 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.13■□□□□ 0.01
Chaf1bQ9D0N7 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Chaf1bQ9D0N7 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chaf1bQ9D0N7 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chaf1bQ9D0N7 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chaf1bQ9D0N7 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.12■□□□□ 0.01
Chaf1bQ9D0N7 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chaf1bQ9D0N7 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chaf1bQ9D0N7 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.12■□□□□ 0.01
Chaf1bQ9D0N7 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chaf1bQ9D0N7 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Chaf1bQ9D0N7 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chaf1bQ9D0N7 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chaf1bQ9D0N7 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chaf1bQ9D0N7 Gm5643-201ENSMUST00000117081 966 ntBASIC15.12■□□□□ 0.01
Chaf1bQ9D0N7 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC15.12■□□□□ 0.01
Chaf1bQ9D0N7 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15.12■□□□□ 0.01
Chaf1bQ9D0N7 Gm7791-201ENSMUST00000219066 539 ntBASIC15.12■□□□□ 0.01
Chaf1bQ9D0N7 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chaf1bQ9D0N7 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chaf1bQ9D0N7 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chaf1bQ9D0N7 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Chaf1bQ9D0N7 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chaf1bQ9D0N7 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chaf1bQ9D0N7 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chaf1bQ9D0N7 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chaf1bQ9D0N7 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Chaf1bQ9D0N7 Actl10-202ENSMUST00000226583 1501 ntBASIC15.12■□□□□ 0.01
Chaf1bQ9D0N7 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chaf1bQ9D0N7 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chaf1bQ9D0N7 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1bQ9D0N7 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1bQ9D0N7 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1bQ9D0N7 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1bQ9D0N7 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
Chaf1bQ9D0N7 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1bQ9D0N7 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1bQ9D0N7 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1bQ9D0N7 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Chaf1bQ9D0N7 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1bQ9D0N7 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1bQ9D0N7 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1bQ9D0N7 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1bQ9D0N7 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1bQ9D0N7 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1bQ9D0N7 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1bQ9D0N7 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1bQ9D0N7 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1bQ9D0N7 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1bQ9D0N7 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1bQ9D0N7 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1bQ9D0N7 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1bQ9D0N7 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1bQ9D0N7 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Chaf1bQ9D0N7 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Chaf1bQ9D0N7 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Chaf1bQ9D0N7 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chaf1bQ9D0N7 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Chaf1bQ9D0N7 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chaf1bQ9D0N7 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.1■□□□□ 0.01
Chaf1bQ9D0N7 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chaf1bQ9D0N7 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.1■□□□□ 0.01
Chaf1bQ9D0N7 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.1■□□□□ 0.01
Chaf1bQ9D0N7 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chaf1bQ9D0N7 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chaf1bQ9D0N7 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chaf1bQ9D0N7 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.1■□□□□ 0.01
Chaf1bQ9D0N7 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.1■□□□□ 0.01
Chaf1bQ9D0N7 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chaf1bQ9D0N7 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chaf1bQ9D0N7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.1■□□□□ 0.01
Chaf1bQ9D0N7 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Chaf1bQ9D0N7 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chaf1bQ9D0N7 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chaf1bQ9D0N7 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Chaf1bQ9D0N7 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms