Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Raet1eQ9CZQ6 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Raet1eQ9CZQ6 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Raet1eQ9CZQ6 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Raet1eQ9CZQ6 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Raet1eQ9CZQ6 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Raet1eQ9CZQ6 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Raet1eQ9CZQ6 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Raet1eQ9CZQ6 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.15□□□□□ -0.14
Raet1eQ9CZQ6 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Raet1eQ9CZQ6 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Raet1eQ9CZQ6 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Raet1eQ9CZQ6 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Raet1eQ9CZQ6 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Raet1eQ9CZQ6 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Raet1eQ9CZQ6 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Raet1eQ9CZQ6 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Raet1eQ9CZQ6 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Raet1eQ9CZQ6 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Raet1eQ9CZQ6 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Raet1eQ9CZQ6 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Raet1eQ9CZQ6 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Raet1eQ9CZQ6 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.14□□□□□ -0.15
Raet1eQ9CZQ6 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Raet1eQ9CZQ6 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Raet1eQ9CZQ6 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.14□□□□□ -0.15
Raet1eQ9CZQ6 Gm26571-201ENSMUST00000181399 666 ntBASIC14.14□□□□□ -0.15
Raet1eQ9CZQ6 Gm27405-201ENSMUST00000184201 112 ntBASIC14.14□□□□□ -0.15
Raet1eQ9CZQ6 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Raet1eQ9CZQ6 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Raet1eQ9CZQ6 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Raet1eQ9CZQ6 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Raet1eQ9CZQ6 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.14□□□□□ -0.15
Raet1eQ9CZQ6 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Raet1eQ9CZQ6 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Raet1eQ9CZQ6 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Raet1eQ9CZQ6 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.14□□□□□ -0.15
Raet1eQ9CZQ6 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.14□□□□□ -0.15
Raet1eQ9CZQ6 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.14□□□□□ -0.15
Raet1eQ9CZQ6 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Raet1eQ9CZQ6 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Raet1eQ9CZQ6 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Raet1eQ9CZQ6 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Raet1eQ9CZQ6 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Raet1eQ9CZQ6 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Raet1eQ9CZQ6 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Raet1eQ9CZQ6 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Raet1eQ9CZQ6 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Raet1eQ9CZQ6 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Raet1eQ9CZQ6 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.13□□□□□ -0.15
Raet1eQ9CZQ6 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Raet1eQ9CZQ6 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Raet1eQ9CZQ6 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Raet1eQ9CZQ6 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.13□□□□□ -0.15
Raet1eQ9CZQ6 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Raet1eQ9CZQ6 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Raet1eQ9CZQ6 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Raet1eQ9CZQ6 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Raet1eQ9CZQ6 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Raet1eQ9CZQ6 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Raet1eQ9CZQ6 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Raet1eQ9CZQ6 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Raet1eQ9CZQ6 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Raet1eQ9CZQ6 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Raet1eQ9CZQ6 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Raet1eQ9CZQ6 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Raet1eQ9CZQ6 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Raet1eQ9CZQ6 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Raet1eQ9CZQ6 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Raet1eQ9CZQ6 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Raet1eQ9CZQ6 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Raet1eQ9CZQ6 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Raet1eQ9CZQ6 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Raet1eQ9CZQ6 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.13□□□□□ -0.15
Raet1eQ9CZQ6 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Raet1eQ9CZQ6 Phf7-203ENSMUST00000226565 1971 ntBASIC14.13□□□□□ -0.15
Raet1eQ9CZQ6 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Raet1eQ9CZQ6 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Raet1eQ9CZQ6 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Raet1eQ9CZQ6 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.12□□□□□ -0.15
Raet1eQ9CZQ6 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Raet1eQ9CZQ6 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Raet1eQ9CZQ6 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Raet1eQ9CZQ6 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Raet1eQ9CZQ6 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Raet1eQ9CZQ6 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Raet1eQ9CZQ6 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.12□□□□□ -0.15
Raet1eQ9CZQ6 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Raet1eQ9CZQ6 Gm13186-201ENSMUST00000118031 316 ntBASIC14.12□□□□□ -0.15
Raet1eQ9CZQ6 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Raet1eQ9CZQ6 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.12□□□□□ -0.15
Raet1eQ9CZQ6 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.12□□□□□ -0.15
Raet1eQ9CZQ6 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.12□□□□□ -0.15
Raet1eQ9CZQ6 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Raet1eQ9CZQ6 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Raet1eQ9CZQ6 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Raet1eQ9CZQ6 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Raet1eQ9CZQ6 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Raet1eQ9CZQ6 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.12□□□□□ -0.15
Raet1eQ9CZQ6 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms