Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.95■□□□□ 0.14
Ssu72Q9CY97 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.95■□□□□ 0.14
Ssu72Q9CY97 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ssu72Q9CY97 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ssu72Q9CY97 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ssu72Q9CY97 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Ssu72Q9CY97 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ssu72Q9CY97 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ssu72Q9CY97 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ssu72Q9CY97 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Ssu72Q9CY97 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.95■□□□□ 0.14
Ssu72Q9CY97 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ssu72Q9CY97 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ssu72Q9CY97 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Ssu72Q9CY97 Gm11336-201ENSMUST00000118168 334 ntBASIC15.95■□□□□ 0.14
Ssu72Q9CY97 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.95■□□□□ 0.14
Ssu72Q9CY97 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
Ssu72Q9CY97 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.95■□□□□ 0.14
Ssu72Q9CY97 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.95■□□□□ 0.14
Ssu72Q9CY97 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC15.95■□□□□ 0.14
Ssu72Q9CY97 Gm21814-202ENSMUST00000203277 873 ntBASIC15.95■□□□□ 0.14
Ssu72Q9CY97 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ssu72Q9CY97 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ssu72Q9CY97 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Ssu72Q9CY97 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ssu72Q9CY97 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Ssu72Q9CY97 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ssu72Q9CY97 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Ssu72Q9CY97 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ssu72Q9CY97 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ssu72Q9CY97 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ssu72Q9CY97 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Ssu72Q9CY97 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ssu72Q9CY97 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ssu72Q9CY97 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ssu72Q9CY97 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ssu72Q9CY97 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ssu72Q9CY97 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ssu72Q9CY97 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ssu72Q9CY97 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ssu72Q9CY97 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ssu72Q9CY97 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ssu72Q9CY97 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ssu72Q9CY97 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ssu72Q9CY97 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.94■□□□□ 0.14
Ssu72Q9CY97 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Ssu72Q9CY97 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.94■□□□□ 0.14
Ssu72Q9CY97 Gm7370-201ENSMUST00000219471 767 ntBASIC15.94■□□□□ 0.14
Ssu72Q9CY97 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ssu72Q9CY97 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ssu72Q9CY97 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Ssu72Q9CY97 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ssu72Q9CY97 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ssu72Q9CY97 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.94■□□□□ 0.14
Ssu72Q9CY97 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Ssu72Q9CY97 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ssu72Q9CY97 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ssu72Q9CY97 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ssu72Q9CY97 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ssu72Q9CY97 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.93■□□□□ 0.14
Ssu72Q9CY97 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Ssu72Q9CY97 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ssu72Q9CY97 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Ssu72Q9CY97 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.93■□□□□ 0.14
Ssu72Q9CY97 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ssu72Q9CY97 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.93■□□□□ 0.14
Ssu72Q9CY97 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Ssu72Q9CY97 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ssu72Q9CY97 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.93■□□□□ 0.14
Ssu72Q9CY97 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Ssu72Q9CY97 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
Ssu72Q9CY97 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.93■□□□□ 0.14
Ssu72Q9CY97 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ssu72Q9CY97 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ssu72Q9CY97 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Ssu72Q9CY97 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ssu72Q9CY97 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Ssu72Q9CY97 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ssu72Q9CY97 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ssu72Q9CY97 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ssu72Q9CY97 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ssu72Q9CY97 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ssu72Q9CY97 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ssu72Q9CY97 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ssu72Q9CY97 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ssu72Q9CY97 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ssu72Q9CY97 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ssu72Q9CY97 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.92■□□□□ 0.14
Ssu72Q9CY97 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.92■□□□□ 0.14
Ssu72Q9CY97 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ssu72Q9CY97 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ssu72Q9CY97 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ssu72Q9CY97 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ssu72Q9CY97 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.92■□□□□ 0.14
Ssu72Q9CY97 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ssu72Q9CY97 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.92■□□□□ 0.14
Ssu72Q9CY97 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Ssu72Q9CY97 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ssu72Q9CY97 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ssu72Q9CY97 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms