Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.19■□□□□ 0.5
Chd1lQ9CXF7 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
Chd1lQ9CXF7 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Chd1lQ9CXF7 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Chd1lQ9CXF7 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chd1lQ9CXF7 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Chd1lQ9CXF7 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Chd1lQ9CXF7 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Chd1lQ9CXF7 Phf7-203ENSMUST00000226565 1971 ntBASIC18.19■□□□□ 0.5
Chd1lQ9CXF7 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chd1lQ9CXF7 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chd1lQ9CXF7 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chd1lQ9CXF7 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chd1lQ9CXF7 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chd1lQ9CXF7 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.18■□□□□ 0.5
Chd1lQ9CXF7 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chd1lQ9CXF7 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Chd1lQ9CXF7 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Chd1lQ9CXF7 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Chd1lQ9CXF7 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Chd1lQ9CXF7 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chd1lQ9CXF7 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Chd1lQ9CXF7 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Chd1lQ9CXF7 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.18■□□□□ 0.5
Chd1lQ9CXF7 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Chd1lQ9CXF7 Gm8495-201ENSMUST00000188740 694 ntBASIC18.18■□□□□ 0.5
Chd1lQ9CXF7 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chd1lQ9CXF7 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Chd1lQ9CXF7 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chd1lQ9CXF7 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Chd1lQ9CXF7 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Chd1lQ9CXF7 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Chd1lQ9CXF7 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC18.18■□□□□ 0.5
Chd1lQ9CXF7 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC18.18■□□□□ 0.5
Chd1lQ9CXF7 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Chd1lQ9CXF7 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.18■□□□□ 0.5
Chd1lQ9CXF7 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Chd1lQ9CXF7 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chd1lQ9CXF7 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Chd1lQ9CXF7 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd1lQ9CXF7 Gm16425-201ENSMUST00000118143 3130 ntBASIC18.17■□□□□ 0.5
Chd1lQ9CXF7 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Chd1lQ9CXF7 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd1lQ9CXF7 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Chd1lQ9CXF7 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Chd1lQ9CXF7 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd1lQ9CXF7 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd1lQ9CXF7 Gm13186-201ENSMUST00000118031 316 ntBASIC18.17■□□□□ 0.5
Chd1lQ9CXF7 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd1lQ9CXF7 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Chd1lQ9CXF7 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Chd1lQ9CXF7 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd1lQ9CXF7 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Chd1lQ9CXF7 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Chd1lQ9CXF7 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd1lQ9CXF7 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd1lQ9CXF7 Sybu-209ENSMUST00000228639 4113 ntBASIC18.17■□□□□ 0.5
Chd1lQ9CXF7 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd1lQ9CXF7 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd1lQ9CXF7 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC18.16■□□□□ 0.5
Chd1lQ9CXF7 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd1lQ9CXF7 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Chd1lQ9CXF7 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Chd1lQ9CXF7 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd1lQ9CXF7 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd1lQ9CXF7 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
Chd1lQ9CXF7 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd1lQ9CXF7 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd1lQ9CXF7 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd1lQ9CXF7 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd1lQ9CXF7 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd1lQ9CXF7 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd1lQ9CXF7 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd1lQ9CXF7 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd1lQ9CXF7 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Chd1lQ9CXF7 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Chd1lQ9CXF7 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd1lQ9CXF7 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Chd1lQ9CXF7 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd1lQ9CXF7 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Chd1lQ9CXF7 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd1lQ9CXF7 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd1lQ9CXF7 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Chd1lQ9CXF7 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd1lQ9CXF7 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd1lQ9CXF7 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.15■□□□□ 0.5
Chd1lQ9CXF7 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd1lQ9CXF7 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd1lQ9CXF7 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd1lQ9CXF7 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Chd1lQ9CXF7 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd1lQ9CXF7 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Chd1lQ9CXF7 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd1lQ9CXF7 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd1lQ9CXF7 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd1lQ9CXF7 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd1lQ9CXF7 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Chd1lQ9CXF7 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd1lQ9CXF7 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Chd1lQ9CXF7 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms