Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx47Q9CWX9 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx47Q9CWX9 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx47Q9CWX9 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Ddx47Q9CWX9 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx47Q9CWX9 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx47Q9CWX9 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Ddx47Q9CWX9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx47Q9CWX9 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx47Q9CWX9 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.56■□□□□ 0.24
Ddx47Q9CWX9 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Ddx47Q9CWX9 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx47Q9CWX9 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx47Q9CWX9 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx47Q9CWX9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx47Q9CWX9 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx47Q9CWX9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Ddx47Q9CWX9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx47Q9CWX9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.56■□□□□ 0.24
Ddx47Q9CWX9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.56■□□□□ 0.24
Ddx47Q9CWX9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx47Q9CWX9 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Ddx47Q9CWX9 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx47Q9CWX9 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.56■□□□□ 0.24
Ddx47Q9CWX9 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx47Q9CWX9 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Ddx47Q9CWX9 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx47Q9CWX9 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx47Q9CWX9 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx47Q9CWX9 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx47Q9CWX9 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx47Q9CWX9 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx47Q9CWX9 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.55■□□□□ 0.24
Ddx47Q9CWX9 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ddx47Q9CWX9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx47Q9CWX9 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.55■□□□□ 0.24
Ddx47Q9CWX9 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx47Q9CWX9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx47Q9CWX9 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.55■□□□□ 0.24
Ddx47Q9CWX9 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Ddx47Q9CWX9 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx47Q9CWX9 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ddx47Q9CWX9 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx47Q9CWX9 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ddx47Q9CWX9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Ddx47Q9CWX9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx47Q9CWX9 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.55■□□□□ 0.24
Ddx47Q9CWX9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx47Q9CWX9 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.55■□□□□ 0.24
Ddx47Q9CWX9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.55■□□□□ 0.24
Ddx47Q9CWX9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx47Q9CWX9 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx47Q9CWX9 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx47Q9CWX9 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.55■□□□□ 0.24
Ddx47Q9CWX9 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx47Q9CWX9 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx47Q9CWX9 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx47Q9CWX9 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx47Q9CWX9 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx47Q9CWX9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx47Q9CWX9 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx47Q9CWX9 Sybu-209ENSMUST00000228639 4113 ntBASIC16.55■□□□□ 0.24
Ddx47Q9CWX9 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx47Q9CWX9 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx47Q9CWX9 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx47Q9CWX9 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx47Q9CWX9 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.54■□□□□ 0.24
Ddx47Q9CWX9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.54■□□□□ 0.24
Ddx47Q9CWX9 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx47Q9CWX9 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx47Q9CWX9 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx47Q9CWX9 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.54■□□□□ 0.24
Ddx47Q9CWX9 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx47Q9CWX9 Gm12085-201ENSMUST00000119263 940 ntBASIC16.54■□□□□ 0.24
Ddx47Q9CWX9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx47Q9CWX9 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx47Q9CWX9 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx47Q9CWX9 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx47Q9CWX9 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx47Q9CWX9 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx47Q9CWX9 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx47Q9CWX9 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.54■□□□□ 0.24
Ddx47Q9CWX9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx47Q9CWX9 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx47Q9CWX9 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Ddx47Q9CWX9 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx47Q9CWX9 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx47Q9CWX9 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx47Q9CWX9 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx47Q9CWX9 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.53■□□□□ 0.24
Ddx47Q9CWX9 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx47Q9CWX9 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ddx47Q9CWX9 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.53■□□□□ 0.24
Ddx47Q9CWX9 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.53■□□□□ 0.24
Ddx47Q9CWX9 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.53■□□□□ 0.24
Ddx47Q9CWX9 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx47Q9CWX9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.53■□□□□ 0.24
Ddx47Q9CWX9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
Ddx47Q9CWX9 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx47Q9CWX9 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms