Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC18.9■□□□□ 0.62
Smc3Q9CW03 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smc3Q9CW03 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Smc3Q9CW03 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smc3Q9CW03 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Smc3Q9CW03 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smc3Q9CW03 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smc3Q9CW03 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smc3Q9CW03 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smc3Q9CW03 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smc3Q9CW03 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smc3Q9CW03 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Smc3Q9CW03 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smc3Q9CW03 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smc3Q9CW03 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smc3Q9CW03 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Smc3Q9CW03 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc3Q9CW03 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc3Q9CW03 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc3Q9CW03 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Smc3Q9CW03 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc3Q9CW03 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc3Q9CW03 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc3Q9CW03 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc3Q9CW03 Gm7889-201ENSMUST00000185591 958 ntBASIC18.89■□□□□ 0.61
Smc3Q9CW03 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc3Q9CW03 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc3Q9CW03 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Smc3Q9CW03 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Smc3Q9CW03 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Smc3Q9CW03 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc3Q9CW03 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smc3Q9CW03 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc3Q9CW03 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc3Q9CW03 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc3Q9CW03 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc3Q9CW03 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc3Q9CW03 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.88■□□□□ 0.61
Smc3Q9CW03 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc3Q9CW03 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smc3Q9CW03 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC18.88■□□□□ 0.61
Smc3Q9CW03 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.88■□□□□ 0.61
Smc3Q9CW03 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Smc3Q9CW03 Gm45058-201ENSMUST00000205810 766 ntBASIC18.88■□□□□ 0.61
Smc3Q9CW03 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.88■□□□□ 0.61
Smc3Q9CW03 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc3Q9CW03 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc3Q9CW03 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc3Q9CW03 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc3Q9CW03 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc3Q9CW03 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc3Q9CW03 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc3Q9CW03 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.88■□□□□ 0.61
Smc3Q9CW03 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc3Q9CW03 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc3Q9CW03 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc3Q9CW03 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Smc3Q9CW03 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.88■□□□□ 0.61
Smc3Q9CW03 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc3Q9CW03 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Smc3Q9CW03 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smc3Q9CW03 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc3Q9CW03 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc3Q9CW03 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.87■□□□□ 0.61
Smc3Q9CW03 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc3Q9CW03 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smc3Q9CW03 Gm18959-201ENSMUST00000208954 655 ntBASIC18.87■□□□□ 0.61
Smc3Q9CW03 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc3Q9CW03 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.87■□□□□ 0.61
Smc3Q9CW03 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc3Q9CW03 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc3Q9CW03 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Smc3Q9CW03 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Smc3Q9CW03 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc3Q9CW03 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc3Q9CW03 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc3Q9CW03 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc3Q9CW03 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Smc3Q9CW03 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc3Q9CW03 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
Smc3Q9CW03 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc3Q9CW03 Gm44616-201ENSMUST00000206417 1732 ntBASIC18.86■□□□□ 0.61
Smc3Q9CW03 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc3Q9CW03 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc3Q9CW03 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Smc3Q9CW03 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Smc3Q9CW03 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.86■□□□□ 0.61
Smc3Q9CW03 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.86■□□□□ 0.61
Smc3Q9CW03 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Smc3Q9CW03 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.86■□□□□ 0.61
Smc3Q9CW03 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.86■□□□□ 0.61
Smc3Q9CW03 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc3Q9CW03 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.86■□□□□ 0.61
Smc3Q9CW03 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
Smc3Q9CW03 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc3Q9CW03 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc3Q9CW03 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc3Q9CW03 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc3Q9CW03 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc3Q9CW03 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms