Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpa3Q9CQ71 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpa3Q9CQ71 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpa3Q9CQ71 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpa3Q9CQ71 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.97■□□□□ 0.31
Rpa3Q9CQ71 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpa3Q9CQ71 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpa3Q9CQ71 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpa3Q9CQ71 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpa3Q9CQ71 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Rpa3Q9CQ71 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.97■□□□□ 0.31
Rpa3Q9CQ71 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
Rpa3Q9CQ71 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rpa3Q9CQ71 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpa3Q9CQ71 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rpa3Q9CQ71 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpa3Q9CQ71 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpa3Q9CQ71 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpa3Q9CQ71 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rpa3Q9CQ71 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Rpa3Q9CQ71 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Rpa3Q9CQ71 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rpa3Q9CQ71 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rpa3Q9CQ71 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpa3Q9CQ71 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.96■□□□□ 0.31
Rpa3Q9CQ71 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rpa3Q9CQ71 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rpa3Q9CQ71 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpa3Q9CQ71 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpa3Q9CQ71 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Rpa3Q9CQ71 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Rpa3Q9CQ71 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
Rpa3Q9CQ71 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rpa3Q9CQ71 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rpa3Q9CQ71 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rpa3Q9CQ71 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rpa3Q9CQ71 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.3
Rpa3Q9CQ71 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Rpa3Q9CQ71 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpa3Q9CQ71 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Rpa3Q9CQ71 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rpa3Q9CQ71 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.95■□□□□ 0.3
Rpa3Q9CQ71 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpa3Q9CQ71 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpa3Q9CQ71 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpa3Q9CQ71 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.95■□□□□ 0.3
Rpa3Q9CQ71 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rpa3Q9CQ71 Olfr129-201ENSMUST00000122318 993 ntBASIC16.95■□□□□ 0.3
Rpa3Q9CQ71 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpa3Q9CQ71 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
Rpa3Q9CQ71 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpa3Q9CQ71 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Rpa3Q9CQ71 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rpa3Q9CQ71 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpa3Q9CQ71 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpa3Q9CQ71 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.95■□□□□ 0.3
Rpa3Q9CQ71 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.95■□□□□ 0.3
Rpa3Q9CQ71 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpa3Q9CQ71 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpa3Q9CQ71 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpa3Q9CQ71 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.94■□□□□ 0.3
Rpa3Q9CQ71 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.94■□□□□ 0.3
Rpa3Q9CQ71 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Rpa3Q9CQ71 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Rpa3Q9CQ71 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rpa3Q9CQ71 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpa3Q9CQ71 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rpa3Q9CQ71 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Rpa3Q9CQ71 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rpa3Q9CQ71 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpa3Q9CQ71 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.94■□□□□ 0.3
Rpa3Q9CQ71 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpa3Q9CQ71 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.94■□□□□ 0.3
Rpa3Q9CQ71 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.94■□□□□ 0.3
Rpa3Q9CQ71 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.94■□□□□ 0.3
Rpa3Q9CQ71 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rpa3Q9CQ71 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpa3Q9CQ71 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Rpa3Q9CQ71 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpa3Q9CQ71 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Rpa3Q9CQ71 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpa3Q9CQ71 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpa3Q9CQ71 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rpa3Q9CQ71 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpa3Q9CQ71 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.93■□□□□ 0.3
Rpa3Q9CQ71 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpa3Q9CQ71 Gm13312-201ENSMUST00000119631 718 ntBASIC16.93■□□□□ 0.3
Rpa3Q9CQ71 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rpa3Q9CQ71 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rpa3Q9CQ71 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.93■□□□□ 0.3
Rpa3Q9CQ71 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rpa3Q9CQ71 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rpa3Q9CQ71 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.93■□□□□ 0.3
Rpa3Q9CQ71 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.93■□□□□ 0.3
Rpa3Q9CQ71 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpa3Q9CQ71 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpa3Q9CQ71 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.93■□□□□ 0.3
Rpa3Q9CQ71 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpa3Q9CQ71 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rpa3Q9CQ71 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms