Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
H2afb1Q9CQ70 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb1Q9CQ70 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb1Q9CQ70 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb1Q9CQ70 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb1Q9CQ70 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb1Q9CQ70 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb1Q9CQ70 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
H2afb1Q9CQ70 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
H2afb1Q9CQ70 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
H2afb1Q9CQ70 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
H2afb1Q9CQ70 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb1Q9CQ70 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb1Q9CQ70 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb1Q9CQ70 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.14□□□□□ -0.31
H2afb1Q9CQ70 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb1Q9CQ70 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.14□□□□□ -0.31
H2afb1Q9CQ70 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb1Q9CQ70 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb1Q9CQ70 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb1Q9CQ70 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.14□□□□□ -0.31
H2afb1Q9CQ70 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.14□□□□□ -0.31
H2afb1Q9CQ70 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb1Q9CQ70 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
H2afb1Q9CQ70 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.14□□□□□ -0.31
H2afb1Q9CQ70 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb1Q9CQ70 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb1Q9CQ70 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC13.14□□□□□ -0.31
H2afb1Q9CQ70 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb1Q9CQ70 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb1Q9CQ70 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb1Q9CQ70 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb1Q9CQ70 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb1Q9CQ70 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb1Q9CQ70 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb1Q9CQ70 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb1Q9CQ70 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.14□□□□□ -0.31
H2afb1Q9CQ70 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb1Q9CQ70 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
H2afb1Q9CQ70 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.14□□□□□ -0.31
H2afb1Q9CQ70 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb1Q9CQ70 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb1Q9CQ70 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb1Q9CQ70 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb1Q9CQ70 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb1Q9CQ70 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb1Q9CQ70 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
H2afb1Q9CQ70 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
H2afb1Q9CQ70 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
H2afb1Q9CQ70 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb1Q9CQ70 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
H2afb1Q9CQ70 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb1Q9CQ70 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb1Q9CQ70 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
H2afb1Q9CQ70 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb1Q9CQ70 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb1Q9CQ70 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
H2afb1Q9CQ70 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb1Q9CQ70 Gm44430-201ENSMUST00000203376 995 ntBASIC13.13□□□□□ -0.31
H2afb1Q9CQ70 AC153881.2-201ENSMUST00000214877 204 ntBASIC13.13□□□□□ -0.31
H2afb1Q9CQ70 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
H2afb1Q9CQ70 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC13.13□□□□□ -0.31
H2afb1Q9CQ70 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb1Q9CQ70 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb1Q9CQ70 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
H2afb1Q9CQ70 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb1Q9CQ70 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb1Q9CQ70 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.13□□□□□ -0.31
H2afb1Q9CQ70 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
H2afb1Q9CQ70 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb1Q9CQ70 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.13□□□□□ -0.31
H2afb1Q9CQ70 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb1Q9CQ70 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb1Q9CQ70 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
H2afb1Q9CQ70 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb1Q9CQ70 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 Gm10052-201ENSMUST00000168019 960 ntBASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 Gm7729-201ENSMUST00000050143 801 ntBASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms