Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim16Q99PP9 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim16Q99PP9 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim16Q99PP9 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trim16Q99PP9 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.72■□□□□ 0.11
Trim16Q99PP9 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim16Q99PP9 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim16Q99PP9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim16Q99PP9 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim16Q99PP9 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim16Q99PP9 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trim16Q99PP9 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim16Q99PP9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim16Q99PP9 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.71■□□□□ 0.11
Trim16Q99PP9 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim16Q99PP9 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim16Q99PP9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim16Q99PP9 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim16Q99PP9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim16Q99PP9 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim16Q99PP9 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim16Q99PP9 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trim16Q99PP9 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim16Q99PP9 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim16Q99PP9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim16Q99PP9 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim16Q99PP9 Gm11355-201ENSMUST00000121120 306 ntBASIC15.71■□□□□ 0.11
Trim16Q99PP9 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.71■□□□□ 0.11
Trim16Q99PP9 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Trim16Q99PP9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim16Q99PP9 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim16Q99PP9 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim16Q99PP9 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim16Q99PP9 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim16Q99PP9 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim16Q99PP9 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim16Q99PP9 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trim16Q99PP9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Trim16Q99PP9 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim16Q99PP9 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim16Q99PP9 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim16Q99PP9 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim16Q99PP9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
Trim16Q99PP9 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trim16Q99PP9 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trim16Q99PP9 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trim16Q99PP9 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim16Q99PP9 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim16Q99PP9 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim16Q99PP9 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim16Q99PP9 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim16Q99PP9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim16Q99PP9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trim16Q99PP9 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim16Q99PP9 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Trim16Q99PP9 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Trim16Q99PP9 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Trim16Q99PP9 Gm11336-201ENSMUST00000118168 334 ntBASIC15.7■□□□□ 0.1
Trim16Q99PP9 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.7■□□□□ 0.1
Trim16Q99PP9 Gm23634-201ENSMUST00000175071 91 ntBASIC15.7■□□□□ 0.1
Trim16Q99PP9 Gm7977-201ENSMUST00000193787 748 ntBASIC15.7■□□□□ 0.1
Trim16Q99PP9 Gm44450-201ENSMUST00000199528 114 ntBASIC15.7■□□□□ 0.1
Trim16Q99PP9 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim16Q99PP9 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.7■□□□□ 0.1
Trim16Q99PP9 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim16Q99PP9 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim16Q99PP9 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim16Q99PP9 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim16Q99PP9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim16Q99PP9 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Trim16Q99PP9 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim16Q99PP9 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim16Q99PP9 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim16Q99PP9 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim16Q99PP9 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.7■□□□□ 0.1
Trim16Q99PP9 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim16Q99PP9 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trim16Q99PP9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim16Q99PP9 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim16Q99PP9 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim16Q99PP9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim16Q99PP9 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trim16Q99PP9 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim16Q99PP9 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim16Q99PP9 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim16Q99PP9 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim16Q99PP9 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim16Q99PP9 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.69■□□□□ 0.1
Trim16Q99PP9 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim16Q99PP9 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim16Q99PP9 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trim16Q99PP9 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trim16Q99PP9 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim16Q99PP9 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim16Q99PP9 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim16Q99PP9 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.69■□□□□ 0.1
Trim16Q99PP9 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim16Q99PP9 Gm37722-201ENSMUST00000193757 208 ntBASIC15.69■□□□□ 0.1
Trim16Q99PP9 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim16Q99PP9 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms