Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn4Q99P72 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn4Q99P72 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn4Q99P72 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Rtn4Q99P72 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn4Q99P72 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn4Q99P72 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn4Q99P72 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn4Q99P72 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn4Q99P72 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn4Q99P72 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn4Q99P72 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC20.46■□□□□ 0.87
Rtn4Q99P72 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC20.46■□□□□ 0.87
Rtn4Q99P72 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn4Q99P72 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC20.46■□□□□ 0.87
Rtn4Q99P72 Gm43037-201ENSMUST00000196808 250 ntBASIC20.46■□□□□ 0.87
Rtn4Q99P72 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC20.46■□□□□ 0.87
Rtn4Q99P72 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC20.46■□□□□ 0.87
Rtn4Q99P72 AC125350.1-201ENSMUST00000225115 903 ntBASIC20.46■□□□□ 0.87
Rtn4Q99P72 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn4Q99P72 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn4Q99P72 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Rtn4Q99P72 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn4Q99P72 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn4Q99P72 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn4Q99P72 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn4Q99P72 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn4Q99P72 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn4Q99P72 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn4Q99P72 Gm43339-201ENSMUST00000200032 1606 ntBASIC20.45■□□□□ 0.87
Rtn4Q99P72 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtn4Q99P72 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtn4Q99P72 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtn4Q99P72 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
Rtn4Q99P72 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC20.45■□□□□ 0.86
Rtn4Q99P72 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtn4Q99P72 Defa-ps4-201ENSMUST00000118021 183 ntBASIC20.45■□□□□ 0.86
Rtn4Q99P72 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC20.45■□□□□ 0.86
Rtn4Q99P72 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtn4Q99P72 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtn4Q99P72 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Rtn4Q99P72 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtn4Q99P72 Zfp264-201ENSMUST00000208656 1563 ntBASIC20.45■□□□□ 0.86
Rtn4Q99P72 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtn4Q99P72 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtn4Q99P72 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtn4Q99P72 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtn4Q99P72 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtn4Q99P72 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtn4Q99P72 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rtn4Q99P72 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rtn4Q99P72 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rtn4Q99P72 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rtn4Q99P72 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rtn4Q99P72 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rtn4Q99P72 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Rtn4Q99P72 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Rtn4Q99P72 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Rtn4Q99P72 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Rtn4Q99P72 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rtn4Q99P72 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC20.44■□□□□ 0.86
Rtn4Q99P72 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC20.44■□□□□ 0.86
Rtn4Q99P72 Gm28659-201ENSMUST00000188013 759 ntBASIC20.44■□□□□ 0.86
Rtn4Q99P72 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rtn4Q99P72 Gm44771-201ENSMUST00000206975 626 ntBASIC20.44■□□□□ 0.86
Rtn4Q99P72 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC20.44■□□□□ 0.86
Rtn4Q99P72 Birc2-201ENSMUST00000054878 378 ntBASIC20.44■□□□□ 0.86
Rtn4Q99P72 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rtn4Q99P72 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rtn4Q99P72 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rtn4Q99P72 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rtn4Q99P72 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rtn4Q99P72 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rtn4Q99P72 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rtn4Q99P72 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Rtn4Q99P72 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rtn4Q99P72 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Rtn4Q99P72 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Rtn4Q99P72 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.43■□□□□ 0.86
Rtn4Q99P72 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Rtn4Q99P72 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rtn4Q99P72 Gm28745-201ENSMUST00000190069 305 ntBASIC20.43■□□□□ 0.86
Rtn4Q99P72 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC20.43■□□□□ 0.86
Rtn4Q99P72 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rtn4Q99P72 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rtn4Q99P72 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rtn4Q99P72 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rtn4Q99P72 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rtn4Q99P72 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rtn4Q99P72 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Rtn4Q99P72 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rtn4Q99P72 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn4Q99P72 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn4Q99P72 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC20.42■□□□□ 0.86
Rtn4Q99P72 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn4Q99P72 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn4Q99P72 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC20.42■□□□□ 0.86
Rtn4Q99P72 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn4Q99P72 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Rtn4Q99P72 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms