Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hdac9Q99N13 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hdac9Q99N13 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hdac9Q99N13 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hdac9Q99N13 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hdac9Q99N13 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hdac9Q99N13 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Hdac9Q99N13 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Hdac9Q99N13 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Hdac9Q99N13 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hdac9Q99N13 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hdac9Q99N13 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hdac9Q99N13 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac9Q99N13 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Hdac9Q99N13 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac9Q99N13 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Hdac9Q99N13 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac9Q99N13 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac9Q99N13 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Hdac9Q99N13 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC18.82■□□□□ 0.6
Hdac9Q99N13 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac9Q99N13 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.82■□□□□ 0.6
Hdac9Q99N13 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC18.82■□□□□ 0.6
Hdac9Q99N13 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac9Q99N13 Gm17271-201ENSMUST00000165535 355 ntBASIC18.82■□□□□ 0.6
Hdac9Q99N13 Gm10576-201ENSMUST00000191927 825 ntBASIC18.82■□□□□ 0.6
Hdac9Q99N13 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac9Q99N13 Gm7229-201ENSMUST00000214719 1007 ntBASIC18.82■□□□□ 0.6
Hdac9Q99N13 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Hdac9Q99N13 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac9Q99N13 Gm15500-202ENSMUST00000071641 1019 ntBASIC18.82■□□□□ 0.6
Hdac9Q99N13 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Hdac9Q99N13 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.82■□□□□ 0.6
Hdac9Q99N13 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac9Q99N13 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Hdac9Q99N13 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac9Q99N13 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac9Q99N13 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac9Q99N13 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Hdac9Q99N13 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac9Q99N13 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac9Q99N13 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.81■□□□□ 0.6
Hdac9Q99N13 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Hdac9Q99N13 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac9Q99N13 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac9Q99N13 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac9Q99N13 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac9Q99N13 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac9Q99N13 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.81■□□□□ 0.6
Hdac9Q99N13 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac9Q99N13 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac9Q99N13 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac9Q99N13 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC18.81■□□□□ 0.6
Hdac9Q99N13 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac9Q99N13 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC18.81■□□□□ 0.6
Hdac9Q99N13 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC18.81■□□□□ 0.6
Hdac9Q99N13 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac9Q99N13 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Hdac9Q99N13 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac9Q99N13 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac9Q99N13 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac9Q99N13 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac9Q99N13 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac9Q99N13 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac9Q99N13 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac9Q99N13 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac9Q99N13 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac9Q99N13 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Hdac9Q99N13 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac9Q99N13 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Hdac9Q99N13 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac9Q99N13 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac9Q99N13 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac9Q99N13 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC18.8■□□□□ 0.6
Hdac9Q99N13 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.8■□□□□ 0.6
Hdac9Q99N13 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Hdac9Q99N13 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac9Q99N13 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac9Q99N13 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac9Q99N13 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac9Q99N13 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac9Q99N13 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac9Q99N13 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac9Q99N13 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac9Q99N13 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac9Q99N13 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac9Q99N13 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Hdac9Q99N13 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac9Q99N13 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac9Q99N13 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac9Q99N13 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac9Q99N13 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac9Q99N13 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Hdac9Q99N13 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac9Q99N13 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac9Q99N13 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac9Q99N13 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac9Q99N13 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac9Q99N13 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac9Q99N13 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms