Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh4Q99MT2 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Msh4Q99MT2 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh4Q99MT2 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh4Q99MT2 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Msh4Q99MT2 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh4Q99MT2 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh4Q99MT2 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh4Q99MT2 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh4Q99MT2 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Msh4Q99MT2 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Msh4Q99MT2 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh4Q99MT2 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh4Q99MT2 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh4Q99MT2 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Msh4Q99MT2 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Msh4Q99MT2 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Msh4Q99MT2 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh4Q99MT2 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Msh4Q99MT2 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.65■□□□□ 0.1
Msh4Q99MT2 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Msh4Q99MT2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.65■□□□□ 0.1
Msh4Q99MT2 Ank2-226ENSMUST00000189368 339 ntBASIC15.65■□□□□ 0.1
Msh4Q99MT2 Gm18421-201ENSMUST00000204122 625 ntBASIC15.65■□□□□ 0.1
Msh4Q99MT2 Gm45328-201ENSMUST00000210942 917 ntBASIC15.65■□□□□ 0.1
Msh4Q99MT2 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Msh4Q99MT2 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh4Q99MT2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Msh4Q99MT2 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh4Q99MT2 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh4Q99MT2 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Msh4Q99MT2 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh4Q99MT2 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Msh4Q99MT2 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Msh4Q99MT2 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Msh4Q99MT2 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh4Q99MT2 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh4Q99MT2 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Msh4Q99MT2 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh4Q99MT2 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Msh4Q99MT2 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Msh4Q99MT2 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Msh4Q99MT2 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh4Q99MT2 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Msh4Q99MT2 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh4Q99MT2 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh4Q99MT2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.64■□□□□ 0.09
Msh4Q99MT2 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Msh4Q99MT2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Msh4Q99MT2 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Msh4Q99MT2 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Msh4Q99MT2 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.64■□□□□ 0.09
Msh4Q99MT2 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Msh4Q99MT2 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Msh4Q99MT2 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Msh4Q99MT2 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh4Q99MT2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh4Q99MT2 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh4Q99MT2 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.64■□□□□ 0.09
Msh4Q99MT2 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Msh4Q99MT2 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh4Q99MT2 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh4Q99MT2 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh4Q99MT2 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh4Q99MT2 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Msh4Q99MT2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh4Q99MT2 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.63■□□□□ 0.09
Msh4Q99MT2 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Msh4Q99MT2 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.63■□□□□ 0.09
Msh4Q99MT2 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.63■□□□□ 0.09
Msh4Q99MT2 Gm29707-201ENSMUST00000196325 491 ntBASIC15.63■□□□□ 0.09
Msh4Q99MT2 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Msh4Q99MT2 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh4Q99MT2 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.63■□□□□ 0.09
Msh4Q99MT2 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.63■□□□□ 0.09
Msh4Q99MT2 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh4Q99MT2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh4Q99MT2 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh4Q99MT2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh4Q99MT2 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh4Q99MT2 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh4Q99MT2 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Msh4Q99MT2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Msh4Q99MT2 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh4Q99MT2 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh4Q99MT2 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh4Q99MT2 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh4Q99MT2 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Msh4Q99MT2 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh4Q99MT2 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh4Q99MT2 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Msh4Q99MT2 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh4Q99MT2 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.62■□□□□ 0.09
Msh4Q99MT2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh4Q99MT2 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Msh4Q99MT2 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh4Q99MT2 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh4Q99MT2 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh4Q99MT2 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh4Q99MT2 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms