Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.59■□□□□ 0.25
Col25a1Q99MQ5 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col25a1Q99MQ5 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col25a1Q99MQ5 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col25a1Q99MQ5 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Col25a1Q99MQ5 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col25a1Q99MQ5 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Col25a1Q99MQ5 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Col25a1Q99MQ5 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Col25a1Q99MQ5 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Col25a1Q99MQ5 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Col25a1Q99MQ5 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC16.58■□□□□ 0.24
Col25a1Q99MQ5 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.58■□□□□ 0.24
Col25a1Q99MQ5 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.58■□□□□ 0.24
Col25a1Q99MQ5 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col25a1Q99MQ5 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col25a1Q99MQ5 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Col25a1Q99MQ5 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col25a1Q99MQ5 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col25a1Q99MQ5 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col25a1Q99MQ5 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col25a1Q99MQ5 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col25a1Q99MQ5 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col25a1Q99MQ5 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Col25a1Q99MQ5 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col25a1Q99MQ5 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col25a1Q99MQ5 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col25a1Q99MQ5 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col25a1Q99MQ5 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col25a1Q99MQ5 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col25a1Q99MQ5 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col25a1Q99MQ5 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col25a1Q99MQ5 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Col25a1Q99MQ5 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col25a1Q99MQ5 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col25a1Q99MQ5 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col25a1Q99MQ5 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.57■□□□□ 0.24
Col25a1Q99MQ5 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.57■□□□□ 0.24
Col25a1Q99MQ5 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC16.57■□□□□ 0.24
Col25a1Q99MQ5 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Col25a1Q99MQ5 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC16.57■□□□□ 0.24
Col25a1Q99MQ5 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col25a1Q99MQ5 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col25a1Q99MQ5 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col25a1Q99MQ5 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.57■□□□□ 0.24
Col25a1Q99MQ5 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col25a1Q99MQ5 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col25a1Q99MQ5 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col25a1Q99MQ5 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col25a1Q99MQ5 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col25a1Q99MQ5 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Col25a1Q99MQ5 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Col25a1Q99MQ5 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col25a1Q99MQ5 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col25a1Q99MQ5 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Col25a1Q99MQ5 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col25a1Q99MQ5 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col25a1Q99MQ5 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.56■□□□□ 0.24
Col25a1Q99MQ5 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col25a1Q99MQ5 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col25a1Q99MQ5 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.56■□□□□ 0.24
Col25a1Q99MQ5 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.56■□□□□ 0.24
Col25a1Q99MQ5 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col25a1Q99MQ5 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Col25a1Q99MQ5 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.56■□□□□ 0.24
Col25a1Q99MQ5 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.56■□□□□ 0.24
Col25a1Q99MQ5 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col25a1Q99MQ5 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col25a1Q99MQ5 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Col25a1Q99MQ5 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Col25a1Q99MQ5 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col25a1Q99MQ5 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.56■□□□□ 0.24
Col25a1Q99MQ5 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col25a1Q99MQ5 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col25a1Q99MQ5 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col25a1Q99MQ5 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col25a1Q99MQ5 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col25a1Q99MQ5 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.55■□□□□ 0.24
Col25a1Q99MQ5 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Col25a1Q99MQ5 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col25a1Q99MQ5 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Col25a1Q99MQ5 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col25a1Q99MQ5 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col25a1Q99MQ5 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col25a1Q99MQ5 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC16.55■□□□□ 0.24
Col25a1Q99MQ5 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.55■□□□□ 0.24
Col25a1Q99MQ5 Gm44430-201ENSMUST00000203376 995 ntBASIC16.55■□□□□ 0.24
Col25a1Q99MQ5 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col25a1Q99MQ5 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col25a1Q99MQ5 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col25a1Q99MQ5 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Col25a1Q99MQ5 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Col25a1Q99MQ5 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col25a1Q99MQ5 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Col25a1Q99MQ5 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col25a1Q99MQ5 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Col25a1Q99MQ5 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col25a1Q99MQ5 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col25a1Q99MQ5 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Col25a1Q99MQ5 Gm6912-201ENSMUST00000117218 544 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms