Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rnf111Q99ML9 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rnf111Q99ML9 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rnf111Q99ML9 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf111Q99ML9 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf111Q99ML9 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.58■□□□□ 0.08
Rnf111Q99ML9 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Rnf111Q99ML9 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Rnf111Q99ML9 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf111Q99ML9 Gm26039-201ENSMUST00000158152 144 ntBASIC15.58■□□□□ 0.08
Rnf111Q99ML9 Gm22697-201ENSMUST00000175194 63 ntBASIC15.58■□□□□ 0.08
Rnf111Q99ML9 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.58■□□□□ 0.08
Rnf111Q99ML9 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.58■□□□□ 0.08
Rnf111Q99ML9 Gm18101-201ENSMUST00000215769 548 ntBASIC15.58■□□□□ 0.08
Rnf111Q99ML9 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.58■□□□□ 0.08
Rnf111Q99ML9 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf111Q99ML9 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf111Q99ML9 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf111Q99ML9 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.58■□□□□ 0.08
Rnf111Q99ML9 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf111Q99ML9 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf111Q99ML9 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Rnf111Q99ML9 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf111Q99ML9 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf111Q99ML9 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Rnf111Q99ML9 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf111Q99ML9 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf111Q99ML9 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf111Q99ML9 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.58■□□□□ 0.08
Rnf111Q99ML9 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf111Q99ML9 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf111Q99ML9 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf111Q99ML9 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf111Q99ML9 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf111Q99ML9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf111Q99ML9 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf111Q99ML9 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Rnf111Q99ML9 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf111Q99ML9 Gm10231-201ENSMUST00000181584 441 ntBASIC15.57■□□□□ 0.08
Rnf111Q99ML9 Gm27389-201ENSMUST00000183622 195 ntBASIC15.57■□□□□ 0.08
Rnf111Q99ML9 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf111Q99ML9 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf111Q99ML9 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.57■□□□□ 0.08
Rnf111Q99ML9 Gm10175-202ENSMUST00000208752 441 ntBASIC15.57■□□□□ 0.08
Rnf111Q99ML9 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf111Q99ML9 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf111Q99ML9 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf111Q99ML9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf111Q99ML9 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
Rnf111Q99ML9 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.57■□□□□ 0.08
Rnf111Q99ML9 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf111Q99ML9 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Rnf111Q99ML9 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Rnf111Q99ML9 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf111Q99ML9 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf111Q99ML9 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf111Q99ML9 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf111Q99ML9 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf111Q99ML9 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.56■□□□□ 0.08
Rnf111Q99ML9 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf111Q99ML9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf111Q99ML9 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf111Q99ML9 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf111Q99ML9 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf111Q99ML9 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf111Q99ML9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.56■□□□□ 0.08
Rnf111Q99ML9 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf111Q99ML9 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Rnf111Q99ML9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.56■□□□□ 0.08
Rnf111Q99ML9 Gm18115-201ENSMUST00000221209 621 ntBASIC15.56■□□□□ 0.08
Rnf111Q99ML9 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf111Q99ML9 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf111Q99ML9 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf111Q99ML9 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf111Q99ML9 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf111Q99ML9 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf111Q99ML9 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf111Q99ML9 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf111Q99ML9 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf111Q99ML9 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf111Q99ML9 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf111Q99ML9 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf111Q99ML9 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
Rnf111Q99ML9 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf111Q99ML9 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Rnf111Q99ML9 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Rnf111Q99ML9 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf111Q99ML9 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.55■□□□□ 0.08
Rnf111Q99ML9 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms