Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Nkx6-1Q99MA9 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx6-1Q99MA9 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15□□□□□ -0.01
Nkx6-1Q99MA9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nkx6-1Q99MA9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx6-1Q99MA9 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Nkx6-1Q99MA9 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nkx6-1Q99MA9 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx6-1Q99MA9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Nkx6-1Q99MA9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Nkx6-1Q99MA9 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Nkx6-1Q99MA9 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx6-1Q99MA9 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx6-1Q99MA9 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx6-1Q99MA9 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Nkx6-1Q99MA9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx6-1Q99MA9 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx6-1Q99MA9 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx6-1Q99MA9 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx6-1Q99MA9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx6-1Q99MA9 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.99□□□□□ -0.01
Nkx6-1Q99MA9 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx6-1Q99MA9 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx6-1Q99MA9 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx6-1Q99MA9 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.99□□□□□ -0.01
Nkx6-1Q99MA9 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Nkx6-1Q99MA9 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx6-1Q99MA9 Gm27300-201ENSMUST00000184085 97 ntBASIC14.99□□□□□ -0.01
Nkx6-1Q99MA9 Gm27335-201ENSMUST00000184758 97 ntBASIC14.99□□□□□ -0.01
Nkx6-1Q99MA9 Gm27321-201ENSMUST00000185021 205 ntBASIC14.99□□□□□ -0.01
Nkx6-1Q99MA9 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.99□□□□□ -0.01
Nkx6-1Q99MA9 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx6-1Q99MA9 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx6-1Q99MA9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx6-1Q99MA9 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Nkx6-1Q99MA9 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx6-1Q99MA9 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx6-1Q99MA9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Nkx6-1Q99MA9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx6-1Q99MA9 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx6-1Q99MA9 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx6-1Q99MA9 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx6-1Q99MA9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx6-1Q99MA9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Nkx6-1Q99MA9 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx6-1Q99MA9 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx6-1Q99MA9 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.98□□□□□ -0.01
Nkx6-1Q99MA9 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx6-1Q99MA9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Nkx6-1Q99MA9 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.98□□□□□ -0.01
Nkx6-1Q99MA9 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx6-1Q99MA9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx6-1Q99MA9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx6-1Q99MA9 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx6-1Q99MA9 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx6-1Q99MA9 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx6-1Q99MA9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx6-1Q99MA9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx6-1Q99MA9 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx6-1Q99MA9 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx6-1Q99MA9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.98□□□□□ -0.01
Nkx6-1Q99MA9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.98□□□□□ -0.01
Nkx6-1Q99MA9 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx6-1Q99MA9 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.98□□□□□ -0.01
Nkx6-1Q99MA9 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.98□□□□□ -0.01
Nkx6-1Q99MA9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx6-1Q99MA9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx6-1Q99MA9 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Nkx6-1Q99MA9 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx6-1Q99MA9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx6-1Q99MA9 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx6-1Q99MA9 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx6-1Q99MA9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx6-1Q99MA9 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx6-1Q99MA9 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx6-1Q99MA9 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx6-1Q99MA9 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 Gm8825-201ENSMUST00000182565 998 ntBASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 Gm4518-201ENSMUST00000182638 718 ntBASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms