Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.05□□□□□ -0.16
Scrt1Q99M85 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.05□□□□□ -0.16
Scrt1Q99M85 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scrt1Q99M85 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scrt1Q99M85 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.05□□□□□ -0.16
Scrt1Q99M85 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scrt1Q99M85 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scrt1Q99M85 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scrt1Q99M85 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scrt1Q99M85 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scrt1Q99M85 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scrt1Q99M85 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scrt1Q99M85 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scrt1Q99M85 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scrt1Q99M85 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scrt1Q99M85 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scrt1Q99M85 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scrt1Q99M85 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scrt1Q99M85 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Scrt1Q99M85 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scrt1Q99M85 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scrt1Q99M85 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scrt1Q99M85 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scrt1Q99M85 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.04□□□□□ -0.16
Scrt1Q99M85 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.04□□□□□ -0.16
Scrt1Q99M85 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Scrt1Q99M85 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Scrt1Q99M85 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scrt1Q99M85 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
Scrt1Q99M85 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scrt1Q99M85 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Scrt1Q99M85 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Scrt1Q99M85 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scrt1Q99M85 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scrt1Q99M85 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scrt1Q99M85 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scrt1Q99M85 Gm7506-201ENSMUST00000207758 815 ntBASIC14.04□□□□□ -0.16
Scrt1Q99M85 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scrt1Q99M85 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.04□□□□□ -0.16
Scrt1Q99M85 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Scrt1Q99M85 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scrt1Q99M85 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scrt1Q99M85 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scrt1Q99M85 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scrt1Q99M85 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scrt1Q99M85 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scrt1Q99M85 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scrt1Q99M85 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scrt1Q99M85 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scrt1Q99M85 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
Scrt1Q99M85 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scrt1Q99M85 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scrt1Q99M85 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scrt1Q99M85 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scrt1Q99M85 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scrt1Q99M85 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scrt1Q99M85 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scrt1Q99M85 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scrt1Q99M85 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.03□□□□□ -0.16
Scrt1Q99M85 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.03□□□□□ -0.16
Scrt1Q99M85 Gm25745-201ENSMUST00000174945 133 ntBASIC14.03□□□□□ -0.16
Scrt1Q99M85 Gm27397-201ENSMUST00000184997 107 ntBASIC14.03□□□□□ -0.16
Scrt1Q99M85 Gm10576-201ENSMUST00000191927 825 ntBASIC14.03□□□□□ -0.16
Scrt1Q99M85 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.03□□□□□ -0.16
Scrt1Q99M85 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.03□□□□□ -0.16
Scrt1Q99M85 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.03□□□□□ -0.16
Scrt1Q99M85 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scrt1Q99M85 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scrt1Q99M85 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scrt1Q99M85 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scrt1Q99M85 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scrt1Q99M85 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Scrt1Q99M85 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scrt1Q99M85 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scrt1Q99M85 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scrt1Q99M85 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scrt1Q99M85 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Scrt1Q99M85 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Scrt1Q99M85 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Scrt1Q99M85 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.03□□□□□ -0.16
Scrt1Q99M85 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scrt1Q99M85 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scrt1Q99M85 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scrt1Q99M85 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scrt1Q99M85 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scrt1Q99M85 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scrt1Q99M85 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scrt1Q99M85 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scrt1Q99M85 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Scrt1Q99M85 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Scrt1Q99M85 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scrt1Q99M85 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Scrt1Q99M85 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scrt1Q99M85 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scrt1Q99M85 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scrt1Q99M85 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Scrt1Q99M85 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scrt1Q99M85 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scrt1Q99M85 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scrt1Q99M85 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms