Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clp1Q99LI9 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clp1Q99LI9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Clp1Q99LI9 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.88■□□□□ 0.29
Clp1Q99LI9 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Clp1Q99LI9 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clp1Q99LI9 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.88■□□□□ 0.29
Clp1Q99LI9 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.88■□□□□ 0.29
Clp1Q99LI9 Gm9682-201ENSMUST00000197505 556 ntBASIC16.88■□□□□ 0.29
Clp1Q99LI9 Gm7787-201ENSMUST00000216858 688 ntBASIC16.88■□□□□ 0.29
Clp1Q99LI9 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clp1Q99LI9 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Clp1Q99LI9 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clp1Q99LI9 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Clp1Q99LI9 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clp1Q99LI9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clp1Q99LI9 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.88■□□□□ 0.29
Clp1Q99LI9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.88■□□□□ 0.29
Clp1Q99LI9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Clp1Q99LI9 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clp1Q99LI9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clp1Q99LI9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clp1Q99LI9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clp1Q99LI9 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clp1Q99LI9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Clp1Q99LI9 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clp1Q99LI9 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Clp1Q99LI9 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.87■□□□□ 0.29
Clp1Q99LI9 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clp1Q99LI9 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Clp1Q99LI9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
Clp1Q99LI9 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clp1Q99LI9 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Clp1Q99LI9 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Clp1Q99LI9 Gm18489-201ENSMUST00000172565 551 ntBASIC16.87■□□□□ 0.29
Clp1Q99LI9 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.87■□□□□ 0.29
Clp1Q99LI9 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Clp1Q99LI9 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.87■□□□□ 0.29
Clp1Q99LI9 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clp1Q99LI9 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clp1Q99LI9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Clp1Q99LI9 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clp1Q99LI9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clp1Q99LI9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clp1Q99LI9 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clp1Q99LI9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clp1Q99LI9 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clp1Q99LI9 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.87■□□□□ 0.29
Clp1Q99LI9 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clp1Q99LI9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Clp1Q99LI9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Clp1Q99LI9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clp1Q99LI9 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clp1Q99LI9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.86■□□□□ 0.29
Clp1Q99LI9 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Clp1Q99LI9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clp1Q99LI9 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clp1Q99LI9 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clp1Q99LI9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Clp1Q99LI9 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Clp1Q99LI9 Gm13597-201ENSMUST00000121239 375 ntBASIC16.86■□□□□ 0.29
Clp1Q99LI9 Mir1895-201ENSMUST00000122615 79 ntBASIC16.86■□□□□ 0.29
Clp1Q99LI9 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Clp1Q99LI9 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clp1Q99LI9 Gm27494-201ENSMUST00000184735 189 ntBASIC16.86■□□□□ 0.29
Clp1Q99LI9 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.86■□□□□ 0.29
Clp1Q99LI9 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.86■□□□□ 0.29
Clp1Q99LI9 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clp1Q99LI9 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.86■□□□□ 0.29
Clp1Q99LI9 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Clp1Q99LI9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clp1Q99LI9 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clp1Q99LI9 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clp1Q99LI9 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clp1Q99LI9 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clp1Q99LI9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clp1Q99LI9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Clp1Q99LI9 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clp1Q99LI9 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clp1Q99LI9 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.85■□□□□ 0.29
Clp1Q99LI9 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clp1Q99LI9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clp1Q99LI9 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clp1Q99LI9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Clp1Q99LI9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Clp1Q99LI9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Clp1Q99LI9 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clp1Q99LI9 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Clp1Q99LI9 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.85■□□□□ 0.29
Clp1Q99LI9 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clp1Q99LI9 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clp1Q99LI9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clp1Q99LI9 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Clp1Q99LI9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Clp1Q99LI9 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clp1Q99LI9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clp1Q99LI9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clp1Q99LI9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Clp1Q99LI9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Clp1Q99LI9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms