Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RtcbQ99LF4 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RtcbQ99LF4 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RtcbQ99LF4 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RtcbQ99LF4 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RtcbQ99LF4 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RtcbQ99LF4 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RtcbQ99LF4 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RtcbQ99LF4 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RtcbQ99LF4 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RtcbQ99LF4 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RtcbQ99LF4 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC19.76■□□□□ 0.75
RtcbQ99LF4 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RtcbQ99LF4 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RtcbQ99LF4 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RtcbQ99LF4 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RtcbQ99LF4 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RtcbQ99LF4 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RtcbQ99LF4 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RtcbQ99LF4 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RtcbQ99LF4 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RtcbQ99LF4 Gm5366-201ENSMUST00000215494 1338 ntBASIC19.76■□□□□ 0.75
RtcbQ99LF4 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RtcbQ99LF4 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RtcbQ99LF4 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RtcbQ99LF4 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RtcbQ99LF4 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RtcbQ99LF4 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC19.75■□□□□ 0.75
RtcbQ99LF4 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RtcbQ99LF4 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RtcbQ99LF4 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC19.75■□□□□ 0.75
RtcbQ99LF4 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RtcbQ99LF4 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RtcbQ99LF4 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RtcbQ99LF4 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RtcbQ99LF4 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
RtcbQ99LF4 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
RtcbQ99LF4 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RtcbQ99LF4 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RtcbQ99LF4 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RtcbQ99LF4 Gm15427-201ENSMUST00000117288 531 ntBASIC19.74■□□□□ 0.75
RtcbQ99LF4 Gm13365-201ENSMUST00000121188 973 ntBASIC19.74■□□□□ 0.75
RtcbQ99LF4 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC19.74■□□□□ 0.75
RtcbQ99LF4 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC19.74■□□□□ 0.75
RtcbQ99LF4 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RtcbQ99LF4 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RtcbQ99LF4 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RtcbQ99LF4 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RtcbQ99LF4 Gm44335-201ENSMUST00000196879 141 ntBASIC19.74■□□□□ 0.75
RtcbQ99LF4 Gm44297-201ENSMUST00000198304 141 ntBASIC19.74■□□□□ 0.75
RtcbQ99LF4 Gm44346-201ENSMUST00000198851 141 ntBASIC19.74■□□□□ 0.75
RtcbQ99LF4 Gm45612-201ENSMUST00000211320 160 ntBASIC19.74■□□□□ 0.75
RtcbQ99LF4 Gm45747-201ENSMUST00000212203 999 ntBASIC19.74■□□□□ 0.75
RtcbQ99LF4 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RtcbQ99LF4 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RtcbQ99LF4 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RtcbQ99LF4 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RtcbQ99LF4 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RtcbQ99LF4 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RtcbQ99LF4 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RtcbQ99LF4 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RtcbQ99LF4 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC19.73■□□□□ 0.75
RtcbQ99LF4 Gm12892-201ENSMUST00000117367 1146 ntBASIC19.73■□□□□ 0.75
RtcbQ99LF4 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC19.73■□□□□ 0.75
RtcbQ99LF4 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC19.73■□□□□ 0.75
RtcbQ99LF4 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC19.73■□□□□ 0.75
RtcbQ99LF4 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RtcbQ99LF4 Gm27301-201ENSMUST00000184012 127 ntBASIC19.73■□□□□ 0.75
RtcbQ99LF4 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RtcbQ99LF4 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RtcbQ99LF4 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RtcbQ99LF4 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RtcbQ99LF4 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RtcbQ99LF4 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RtcbQ99LF4 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC19.73■□□□□ 0.75
RtcbQ99LF4 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
RtcbQ99LF4 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RtcbQ99LF4 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RtcbQ99LF4 Gm13332-201ENSMUST00000120451 1398 ntBASIC19.72■□□□□ 0.75
RtcbQ99LF4 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RtcbQ99LF4 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RtcbQ99LF4 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC19.72■□□□□ 0.75
RtcbQ99LF4 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RtcbQ99LF4 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC19.72■□□□□ 0.75
RtcbQ99LF4 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC19.72■□□□□ 0.75
RtcbQ99LF4 Gm38318-201ENSMUST00000195769 1706 ntBASIC19.72■□□□□ 0.75
RtcbQ99LF4 Rarb-207ENSMUST00000225921 2756 ntBASIC19.72■□□□□ 0.75
RtcbQ99LF4 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RtcbQ99LF4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RtcbQ99LF4 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RtcbQ99LF4 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.72■□□□□ 0.75
RtcbQ99LF4 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RtcbQ99LF4 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RtcbQ99LF4 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
RtcbQ99LF4 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RtcbQ99LF4 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RtcbQ99LF4 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RtcbQ99LF4 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RtcbQ99LF4 Nrn1-204ENSMUST00000224323 1779 ntBASIC19.71■□□□□ 0.75
RtcbQ99LF4 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms