Protein–RNA interactions for Protein: Q99KR6

Rnf34, E3 ubiquitin-protein ligase RNF34, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf34Q99KR6 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf34Q99KR6 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf34Q99KR6 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.26■□□□□ 0.35
Rnf34Q99KR6 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf34Q99KR6 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf34Q99KR6 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf34Q99KR6 Gm45605-201ENSMUST00000210265 4269 ntBASIC17.26■□□□□ 0.35
Rnf34Q99KR6 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.26■□□□□ 0.35
Rnf34Q99KR6 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.26■□□□□ 0.35
Rnf34Q99KR6 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf34Q99KR6 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.25■□□□□ 0.35
Rnf34Q99KR6 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf34Q99KR6 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf34Q99KR6 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf34Q99KR6 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf34Q99KR6 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf34Q99KR6 Gm11539-201ENSMUST00000119837 557 ntBASIC17.25■□□□□ 0.35
Rnf34Q99KR6 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.25■□□□□ 0.35
Rnf34Q99KR6 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf34Q99KR6 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.25■□□□□ 0.35
Rnf34Q99KR6 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf34Q99KR6 Gm8520-201ENSMUST00000186517 868 ntBASIC17.25■□□□□ 0.35
Rnf34Q99KR6 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.25■□□□□ 0.35
Rnf34Q99KR6 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf34Q99KR6 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.25■□□□□ 0.35
Rnf34Q99KR6 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf34Q99KR6 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf34Q99KR6 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.25■□□□□ 0.35
Rnf34Q99KR6 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rnf34Q99KR6 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf34Q99KR6 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf34Q99KR6 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf34Q99KR6 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf34Q99KR6 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf34Q99KR6 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf34Q99KR6 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Rnf34Q99KR6 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf34Q99KR6 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf34Q99KR6 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf34Q99KR6 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf34Q99KR6 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf34Q99KR6 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf34Q99KR6 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf34Q99KR6 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf34Q99KR6 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.24■□□□□ 0.35
Rnf34Q99KR6 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Rnf34Q99KR6 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.24■□□□□ 0.35
Rnf34Q99KR6 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.24■□□□□ 0.35
Rnf34Q99KR6 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.24■□□□□ 0.35
Rnf34Q99KR6 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf34Q99KR6 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf34Q99KR6 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
Rnf34Q99KR6 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.24■□□□□ 0.35
Rnf34Q99KR6 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf34Q99KR6 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf34Q99KR6 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf34Q99KR6 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.23■□□□□ 0.35
Rnf34Q99KR6 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rnf34Q99KR6 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Rnf34Q99KR6 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf34Q99KR6 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf34Q99KR6 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf34Q99KR6 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.23■□□□□ 0.35
Rnf34Q99KR6 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf34Q99KR6 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.23■□□□□ 0.35
Rnf34Q99KR6 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.23■□□□□ 0.35
Rnf34Q99KR6 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf34Q99KR6 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf34Q99KR6 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf34Q99KR6 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf34Q99KR6 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf34Q99KR6 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.23■□□□□ 0.35
Rnf34Q99KR6 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf34Q99KR6 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf34Q99KR6 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf34Q99KR6 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf34Q99KR6 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf34Q99KR6 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf34Q99KR6 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf34Q99KR6 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Rnf34Q99KR6 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf34Q99KR6 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf34Q99KR6 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf34Q99KR6 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf34Q99KR6 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf34Q99KR6 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf34Q99KR6 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf34Q99KR6 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Rnf34Q99KR6 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Rnf34Q99KR6 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf34Q99KR6 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf34Q99KR6 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf34Q99KR6 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf34Q99KR6 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.22■□□□□ 0.35
Rnf34Q99KR6 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Rnf34Q99KR6 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf34Q99KR6 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf34Q99KR6 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf34Q99KR6 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf34Q99KR6 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms