Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Usp11Q99K46 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Usp11Q99K46 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp11Q99K46 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Usp11Q99K46 Phf7-203ENSMUST00000226565 1971 ntBASIC16.96■□□□□ 0.31
Usp11Q99K46 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp11Q99K46 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp11Q99K46 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Usp11Q99K46 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Usp11Q99K46 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Usp11Q99K46 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp11Q99K46 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp11Q99K46 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp11Q99K46 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Usp11Q99K46 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp11Q99K46 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Usp11Q99K46 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Usp11Q99K46 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Usp11Q99K46 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.95■□□□□ 0.3
Usp11Q99K46 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Usp11Q99K46 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Usp11Q99K46 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Usp11Q99K46 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.95■□□□□ 0.3
Usp11Q99K46 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp11Q99K46 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.95■□□□□ 0.3
Usp11Q99K46 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp11Q99K46 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.95■□□□□ 0.3
Usp11Q99K46 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Usp11Q99K46 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp11Q99K46 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Usp11Q99K46 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Usp11Q99K46 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp11Q99K46 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Usp11Q99K46 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp11Q99K46 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.95■□□□□ 0.3
Usp11Q99K46 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp11Q99K46 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp11Q99K46 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Usp11Q99K46 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp11Q99K46 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.94■□□□□ 0.3
Usp11Q99K46 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp11Q99K46 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp11Q99K46 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp11Q99K46 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
Usp11Q99K46 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp11Q99K46 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp11Q99K46 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp11Q99K46 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.94■□□□□ 0.3
Usp11Q99K46 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp11Q99K46 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp11Q99K46 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp11Q99K46 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp11Q99K46 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp11Q99K46 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp11Q99K46 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp11Q99K46 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp11Q99K46 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Usp11Q99K46 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Usp11Q99K46 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp11Q99K46 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp11Q99K46 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp11Q99K46 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp11Q99K46 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.94■□□□□ 0.3
Usp11Q99K46 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp11Q99K46 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Usp11Q99K46 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Usp11Q99K46 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp11Q99K46 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp11Q99K46 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp11Q99K46 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp11Q99K46 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp11Q99K46 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Usp11Q99K46 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp11Q99K46 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp11Q99K46 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp11Q99K46 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp11Q99K46 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.93■□□□□ 0.3
Usp11Q99K46 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.93■□□□□ 0.3
Usp11Q99K46 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Usp11Q99K46 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.93■□□□□ 0.3
Usp11Q99K46 Gm18115-201ENSMUST00000221209 621 ntBASIC16.93■□□□□ 0.3
Usp11Q99K46 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp11Q99K46 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp11Q99K46 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp11Q99K46 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp11Q99K46 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Usp11Q99K46 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Usp11Q99K46 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp11Q99K46 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp11Q99K46 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp11Q99K46 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp11Q99K46 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Usp11Q99K46 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp11Q99K46 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp11Q99K46 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp11Q99K46 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Usp11Q99K46 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.92■□□□□ 0.3
Usp11Q99K46 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp11Q99K46 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Usp11Q99K46 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms