Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcd2Q99JR8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Smarcd2Q99JR8 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcd2Q99JR8 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcd2Q99JR8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcd2Q99JR8 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcd2Q99JR8 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.17■□□□□ 0.18
Smarcd2Q99JR8 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
Smarcd2Q99JR8 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcd2Q99JR8 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcd2Q99JR8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcd2Q99JR8 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcd2Q99JR8 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcd2Q99JR8 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcd2Q99JR8 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcd2Q99JR8 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.17■□□□□ 0.18
Smarcd2Q99JR8 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.17■□□□□ 0.18
Smarcd2Q99JR8 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Smarcd2Q99JR8 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.17■□□□□ 0.18
Smarcd2Q99JR8 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.17■□□□□ 0.18
Smarcd2Q99JR8 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcd2Q99JR8 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcd2Q99JR8 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcd2Q99JR8 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.17■□□□□ 0.18
Smarcd2Q99JR8 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcd2Q99JR8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcd2Q99JR8 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcd2Q99JR8 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.17■□□□□ 0.18
Smarcd2Q99JR8 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcd2Q99JR8 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcd2Q99JR8 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcd2Q99JR8 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Smarcd2Q99JR8 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcd2Q99JR8 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcd2Q99JR8 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Smarcd2Q99JR8 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Smarcd2Q99JR8 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcd2Q99JR8 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.16■□□□□ 0.18
Smarcd2Q99JR8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcd2Q99JR8 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Smarcd2Q99JR8 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.16■□□□□ 0.18
Smarcd2Q99JR8 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcd2Q99JR8 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcd2Q99JR8 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcd2Q99JR8 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Smarcd2Q99JR8 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Smarcd2Q99JR8 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcd2Q99JR8 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcd2Q99JR8 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcd2Q99JR8 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.16■□□□□ 0.18
Smarcd2Q99JR8 Gm15358-201ENSMUST00000119249 520 ntBASIC16.16■□□□□ 0.18
Smarcd2Q99JR8 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.16■□□□□ 0.18
Smarcd2Q99JR8 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcd2Q99JR8 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcd2Q99JR8 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcd2Q99JR8 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcd2Q99JR8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcd2Q99JR8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcd2Q99JR8 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcd2Q99JR8 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcd2Q99JR8 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Smarcd2Q99JR8 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcd2Q99JR8 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Smarcd2Q99JR8 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Smarcd2Q99JR8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcd2Q99JR8 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Smarcd2Q99JR8 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcd2Q99JR8 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcd2Q99JR8 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcd2Q99JR8 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.15■□□□□ 0.18
Smarcd2Q99JR8 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.15■□□□□ 0.18
Smarcd2Q99JR8 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Smarcd2Q99JR8 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcd2Q99JR8 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcd2Q99JR8 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Smarcd2Q99JR8 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.15■□□□□ 0.18
Smarcd2Q99JR8 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcd2Q99JR8 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcd2Q99JR8 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcd2Q99JR8 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Smarcd2Q99JR8 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcd2Q99JR8 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcd2Q99JR8 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.15■□□□□ 0.18
Smarcd2Q99JR8 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcd2Q99JR8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Smarcd2Q99JR8 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Smarcd2Q99JR8 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Smarcd2Q99JR8 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcd2Q99JR8 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcd2Q99JR8 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcd2Q99JR8 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.14■□□□□ 0.17
Smarcd2Q99JR8 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.14■□□□□ 0.17
Smarcd2Q99JR8 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcd2Q99JR8 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Smarcd2Q99JR8 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcd2Q99JR8 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcd2Q99JR8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcd2Q99JR8 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.14■□□□□ 0.17
Smarcd2Q99JR8 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.14■□□□□ 0.17
Smarcd2Q99JR8 Gm4899-201ENSMUST00000178708 719 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms