Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp1aQ921W0 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Chmp1aQ921W0 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.2□□□□□ -0.14
Chmp1aQ921W0 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp1aQ921W0 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp1aQ921W0 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp1aQ921W0 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Chmp1aQ921W0 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp1aQ921W0 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.2□□□□□ -0.14
Chmp1aQ921W0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.2□□□□□ -0.14
Chmp1aQ921W0 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp1aQ921W0 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp1aQ921W0 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp1aQ921W0 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp1aQ921W0 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp1aQ921W0 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp1aQ921W0 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp1aQ921W0 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp1aQ921W0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp1aQ921W0 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp1aQ921W0 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp1aQ921W0 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Chmp1aQ921W0 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1aQ921W0 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1aQ921W0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1aQ921W0 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1aQ921W0 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1aQ921W0 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1aQ921W0 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1aQ921W0 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.19□□□□□ -0.14
Chmp1aQ921W0 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Chmp1aQ921W0 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.19□□□□□ -0.14
Chmp1aQ921W0 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1aQ921W0 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1aQ921W0 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.19□□□□□ -0.14
Chmp1aQ921W0 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1aQ921W0 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Chmp1aQ921W0 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Chmp1aQ921W0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1aQ921W0 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1aQ921W0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Chmp1aQ921W0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1aQ921W0 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.19□□□□□ -0.14
Chmp1aQ921W0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC14.19□□□□□ -0.14
Chmp1aQ921W0 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.19□□□□□ -0.14
Chmp1aQ921W0 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Chmp1aQ921W0 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1aQ921W0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1aQ921W0 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1aQ921W0 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1aQ921W0 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.19□□□□□ -0.14
Chmp1aQ921W0 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1aQ921W0 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1aQ921W0 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1aQ921W0 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1aQ921W0 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1aQ921W0 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.19□□□□□ -0.14
Chmp1aQ921W0 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1aQ921W0 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1aQ921W0 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp1aQ921W0 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp1aQ921W0 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.18□□□□□ -0.14
Chmp1aQ921W0 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp1aQ921W0 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp1aQ921W0 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp1aQ921W0 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp1aQ921W0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp1aQ921W0 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp1aQ921W0 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp1aQ921W0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp1aQ921W0 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp1aQ921W0 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Chmp1aQ921W0 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp1aQ921W0 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp1aQ921W0 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp1aQ921W0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC14.18□□□□□ -0.14
Chmp1aQ921W0 Gm20049-201ENSMUST00000219950 730 ntBASIC14.18□□□□□ -0.14
Chmp1aQ921W0 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp1aQ921W0 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Chmp1aQ921W0 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp1aQ921W0 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp1aQ921W0 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp1aQ921W0 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp1aQ921W0 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Chmp1aQ921W0 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.18□□□□□ -0.14
Chmp1aQ921W0 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp1aQ921W0 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp1aQ921W0 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp1aQ921W0 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp1aQ921W0 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Chmp1aQ921W0 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp1aQ921W0 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp1aQ921W0 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Chmp1aQ921W0 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp1aQ921W0 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp1aQ921W0 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp1aQ921W0 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp1aQ921W0 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp1aQ921W0 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp1aQ921W0 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms