Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdha3Q91Y16 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdha3Q91Y16 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdha3Q91Y16 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Pcdha3Q91Y16 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha3Q91Y16 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha3Q91Y16 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Pcdha3Q91Y16 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha3Q91Y16 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha3Q91Y16 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha3Q91Y16 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Pcdha3Q91Y16 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Pcdha3Q91Y16 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.78■□□□□ 0.28
Pcdha3Q91Y16 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha3Q91Y16 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha3Q91Y16 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha3Q91Y16 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha3Q91Y16 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha3Q91Y16 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.78■□□□□ 0.28
Pcdha3Q91Y16 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Pcdha3Q91Y16 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha3Q91Y16 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha3Q91Y16 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha3Q91Y16 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha3Q91Y16 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha3Q91Y16 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha3Q91Y16 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha3Q91Y16 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha3Q91Y16 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha3Q91Y16 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdha3Q91Y16 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdha3Q91Y16 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdha3Q91Y16 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdha3Q91Y16 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.77■□□□□ 0.28
Pcdha3Q91Y16 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdha3Q91Y16 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdha3Q91Y16 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Pcdha3Q91Y16 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdha3Q91Y16 Olfr129-201ENSMUST00000122318 993 ntBASIC16.77■□□□□ 0.28
Pcdha3Q91Y16 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.77■□□□□ 0.28
Pcdha3Q91Y16 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdha3Q91Y16 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdha3Q91Y16 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Pcdha3Q91Y16 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.77■□□□□ 0.28
Pcdha3Q91Y16 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdha3Q91Y16 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdha3Q91Y16 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdha3Q91Y16 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdha3Q91Y16 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.77■□□□□ 0.27
Pcdha3Q91Y16 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdha3Q91Y16 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.77■□□□□ 0.27
Pcdha3Q91Y16 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdha3Q91Y16 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdha3Q91Y16 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdha3Q91Y16 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdha3Q91Y16 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdha3Q91Y16 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Pcdha3Q91Y16 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdha3Q91Y16 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdha3Q91Y16 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdha3Q91Y16 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdha3Q91Y16 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdha3Q91Y16 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdha3Q91Y16 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Pcdha3Q91Y16 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdha3Q91Y16 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Pcdha3Q91Y16 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdha3Q91Y16 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdha3Q91Y16 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Pcdha3Q91Y16 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.76■□□□□ 0.27
Pcdha3Q91Y16 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdha3Q91Y16 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdha3Q91Y16 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdha3Q91Y16 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdha3Q91Y16 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Pcdha3Q91Y16 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdha3Q91Y16 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Pcdha3Q91Y16 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdha3Q91Y16 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdha3Q91Y16 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha3Q91Y16 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha3Q91Y16 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha3Q91Y16 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha3Q91Y16 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha3Q91Y16 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha3Q91Y16 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.75■□□□□ 0.27
Pcdha3Q91Y16 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.75■□□□□ 0.27
Pcdha3Q91Y16 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha3Q91Y16 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha3Q91Y16 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.75■□□□□ 0.27
Pcdha3Q91Y16 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.75■□□□□ 0.27
Pcdha3Q91Y16 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha3Q91Y16 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.75■□□□□ 0.27
Pcdha3Q91Y16 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha3Q91Y16 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.75■□□□□ 0.27
Pcdha3Q91Y16 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha3Q91Y16 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha3Q91Y16 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha3Q91Y16 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.75■□□□□ 0.27
Pcdha3Q91Y16 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms