Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb1Q91Y08 Gm15794-201ENSMUST00000120182 631 ntBASIC16.7■□□□□ 0.26
Pcdhb1Q91Y08 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdhb1Q91Y08 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Pcdhb1Q91Y08 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb1Q91Y08 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Pcdhb1Q91Y08 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb1Q91Y08 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb1Q91Y08 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb1Q91Y08 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb1Q91Y08 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb1Q91Y08 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb1Q91Y08 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb1Q91Y08 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb1Q91Y08 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb1Q91Y08 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb1Q91Y08 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.7■□□□□ 0.26
Pcdhb1Q91Y08 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb1Q91Y08 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb1Q91Y08 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhb1Q91Y08 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb1Q91Y08 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb1Q91Y08 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb1Q91Y08 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb1Q91Y08 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb1Q91Y08 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb1Q91Y08 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb1Q91Y08 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Pcdhb1Q91Y08 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Pcdhb1Q91Y08 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Pcdhb1Q91Y08 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb1Q91Y08 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb1Q91Y08 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb1Q91Y08 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb1Q91Y08 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb1Q91Y08 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb1Q91Y08 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb1Q91Y08 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb1Q91Y08 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb1Q91Y08 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb1Q91Y08 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhb1Q91Y08 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhb1Q91Y08 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb1Q91Y08 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Pcdhb1Q91Y08 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.68■□□□□ 0.26
Pcdhb1Q91Y08 Mir6404-201ENSMUST00000183699 94 ntBASIC16.68■□□□□ 0.26
Pcdhb1Q91Y08 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.68■□□□□ 0.26
Pcdhb1Q91Y08 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Pcdhb1Q91Y08 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb1Q91Y08 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb1Q91Y08 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb1Q91Y08 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb1Q91Y08 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb1Q91Y08 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb1Q91Y08 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb1Q91Y08 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb1Q91Y08 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.67■□□□□ 0.26
Pcdhb1Q91Y08 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb1Q91Y08 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb1Q91Y08 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb1Q91Y08 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb1Q91Y08 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb1Q91Y08 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb1Q91Y08 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb1Q91Y08 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.67■□□□□ 0.26
Pcdhb1Q91Y08 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.67■□□□□ 0.26
Pcdhb1Q91Y08 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.67■□□□□ 0.26
Pcdhb1Q91Y08 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb1Q91Y08 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb1Q91Y08 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb1Q91Y08 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb1Q91Y08 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb1Q91Y08 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Pcdhb1Q91Y08 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb1Q91Y08 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb1Q91Y08 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Pcdhb1Q91Y08 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb1Q91Y08 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb1Q91Y08 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.66■□□□□ 0.26
Pcdhb1Q91Y08 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Pcdhb1Q91Y08 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb1Q91Y08 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.66■□□□□ 0.26
Pcdhb1Q91Y08 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb1Q91Y08 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb1Q91Y08 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb1Q91Y08 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.66■□□□□ 0.26
Pcdhb1Q91Y08 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb1Q91Y08 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb1Q91Y08 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb1Q91Y08 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb1Q91Y08 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb1Q91Y08 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb1Q91Y08 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb1Q91Y08 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb1Q91Y08 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb1Q91Y08 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.65■□□□□ 0.26
Pcdhb1Q91Y08 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.65■□□□□ 0.26
Pcdhb1Q91Y08 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb1Q91Y08 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.65■□□□□ 0.26
Pcdhb1Q91Y08 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms