Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb3Q91XZ7 Gm9987-201ENSMUST00000069768 567 ntBASIC16.08■□□□□ 0.16
Pcdhb3Q91XZ7 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb3Q91XZ7 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb3Q91XZ7 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb3Q91XZ7 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb3Q91XZ7 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb3Q91XZ7 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb3Q91XZ7 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb3Q91XZ7 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Pcdhb3Q91XZ7 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcdhb3Q91XZ7 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb3Q91XZ7 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb3Q91XZ7 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb3Q91XZ7 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb3Q91XZ7 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb3Q91XZ7 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb3Q91XZ7 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb3Q91XZ7 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb3Q91XZ7 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb3Q91XZ7 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb3Q91XZ7 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb3Q91XZ7 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.07■□□□□ 0.16
Pcdhb3Q91XZ7 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.07■□□□□ 0.16
Pcdhb3Q91XZ7 Gm43799-201ENSMUST00000201845 579 ntBASIC16.07■□□□□ 0.16
Pcdhb3Q91XZ7 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb3Q91XZ7 Gm3375-201ENSMUST00000203929 796 ntBASIC16.07■□□□□ 0.16
Pcdhb3Q91XZ7 Gm30025-201ENSMUST00000218555 728 ntBASIC16.07■□□□□ 0.16
Pcdhb3Q91XZ7 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb3Q91XZ7 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Pcdhb3Q91XZ7 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb3Q91XZ7 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb3Q91XZ7 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb3Q91XZ7 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhb3Q91XZ7 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb3Q91XZ7 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb3Q91XZ7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb3Q91XZ7 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb3Q91XZ7 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb3Q91XZ7 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb3Q91XZ7 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhb3Q91XZ7 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb3Q91XZ7 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb3Q91XZ7 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb3Q91XZ7 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb3Q91XZ7 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb3Q91XZ7 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb3Q91XZ7 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Pcdhb3Q91XZ7 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
Pcdhb3Q91XZ7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb3Q91XZ7 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb3Q91XZ7 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.06■□□□□ 0.16
Pcdhb3Q91XZ7 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb3Q91XZ7 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb3Q91XZ7 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.06■□□□□ 0.16
Pcdhb3Q91XZ7 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.06■□□□□ 0.16
Pcdhb3Q91XZ7 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.06■□□□□ 0.16
Pcdhb3Q91XZ7 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.06■□□□□ 0.16
Pcdhb3Q91XZ7 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb3Q91XZ7 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb3Q91XZ7 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb3Q91XZ7 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb3Q91XZ7 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb3Q91XZ7 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Pcdhb3Q91XZ7 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Pcdhb3Q91XZ7 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb3Q91XZ7 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb3Q91XZ7 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Pcdhb3Q91XZ7 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb3Q91XZ7 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb3Q91XZ7 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb3Q91XZ7 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb3Q91XZ7 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb3Q91XZ7 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Pcdhb3Q91XZ7 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb3Q91XZ7 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb3Q91XZ7 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb3Q91XZ7 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb3Q91XZ7 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb3Q91XZ7 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Pcdhb3Q91XZ7 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb3Q91XZ7 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb3Q91XZ7 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb3Q91XZ7 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb3Q91XZ7 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb3Q91XZ7 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb3Q91XZ7 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb3Q91XZ7 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.05■□□□□ 0.16
Pcdhb3Q91XZ7 Gm28196-201ENSMUST00000187719 640 ntBASIC16.05■□□□□ 0.16
Pcdhb3Q91XZ7 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.05■□□□□ 0.16
Pcdhb3Q91XZ7 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.05■□□□□ 0.16
Pcdhb3Q91XZ7 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb3Q91XZ7 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb3Q91XZ7 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb3Q91XZ7 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Pcdhb3Q91XZ7 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb3Q91XZ7 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb3Q91XZ7 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb3Q91XZ7 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb3Q91XZ7 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms