Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgc3Q91XX1 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgc3Q91XX1 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdhgc3Q91XX1 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdhgc3Q91XX1 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgc3Q91XX1 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhgc3Q91XX1 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgc3Q91XX1 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhgc3Q91XX1 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Pcdhgc3Q91XX1 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgc3Q91XX1 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Pcdhgc3Q91XX1 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgc3Q91XX1 Gm13168-201ENSMUST00000121771 632 ntBASIC15.2■□□□□ 0.02
Pcdhgc3Q91XX1 Gm12382-201ENSMUST00000122005 922 ntBASIC15.2■□□□□ 0.02
Pcdhgc3Q91XX1 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdhgc3Q91XX1 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdhgc3Q91XX1 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Pcdhgc3Q91XX1 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgc3Q91XX1 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgc3Q91XX1 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgc3Q91XX1 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgc3Q91XX1 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhgc3Q91XX1 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgc3Q91XX1 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgc3Q91XX1 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgc3Q91XX1 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgc3Q91XX1 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgc3Q91XX1 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhgc3Q91XX1 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgc3Q91XX1 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgc3Q91XX1 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgc3Q91XX1 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Pcdhgc3Q91XX1 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgc3Q91XX1 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhgc3Q91XX1 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgc3Q91XX1 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdhgc3Q91XX1 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgc3Q91XX1 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgc3Q91XX1 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Pcdhgc3Q91XX1 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgc3Q91XX1 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgc3Q91XX1 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Pcdhgc3Q91XX1 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.19■□□□□ 0.02
Pcdhgc3Q91XX1 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdhgc3Q91XX1 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.19■□□□□ 0.02
Pcdhgc3Q91XX1 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgc3Q91XX1 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgc3Q91XX1 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgc3Q91XX1 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgc3Q91XX1 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Pcdhgc3Q91XX1 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgc3Q91XX1 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgc3Q91XX1 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgc3Q91XX1 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgc3Q91XX1 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgc3Q91XX1 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.18■□□□□ 0.02
Pcdhgc3Q91XX1 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgc3Q91XX1 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgc3Q91XX1 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgc3Q91XX1 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgc3Q91XX1 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhgc3Q91XX1 Gm10653-202ENSMUST00000139570 835 ntBASIC15.18■□□□□ 0.02
Pcdhgc3Q91XX1 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdhgc3Q91XX1 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.18■□□□□ 0.02
Pcdhgc3Q91XX1 Gm9731-201ENSMUST00000209480 747 ntBASIC15.18■□□□□ 0.02
Pcdhgc3Q91XX1 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdhgc3Q91XX1 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdhgc3Q91XX1 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgc3Q91XX1 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.18■□□□□ 0.02
Pcdhgc3Q91XX1 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgc3Q91XX1 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgc3Q91XX1 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgc3Q91XX1 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgc3Q91XX1 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgc3Q91XX1 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgc3Q91XX1 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc3Q91XX1 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc3Q91XX1 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc3Q91XX1 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc3Q91XX1 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc3Q91XX1 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc3Q91XX1 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc3Q91XX1 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.17■□□□□ 0.02
Pcdhgc3Q91XX1 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Pcdhgc3Q91XX1 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc3Q91XX1 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhgc3Q91XX1 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhgc3Q91XX1 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc3Q91XX1 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc3Q91XX1 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.17■□□□□ 0.02
Pcdhgc3Q91XX1 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc3Q91XX1 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc3Q91XX1 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc3Q91XX1 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.17■□□□□ 0.02
Pcdhgc3Q91XX1 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.17■□□□□ 0.02
Pcdhgc3Q91XX1 Gm19087-201ENSMUST00000191430 946 ntBASIC15.17■□□□□ 0.02
Pcdhgc3Q91XX1 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhgc3Q91XX1 Gm45691-201ENSMUST00000206905 1120 ntBASIC15.17■□□□□ 0.02
Pcdhgc3Q91XX1 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Pcdhgc3Q91XX1 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms