Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgc5Q91XW9 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Pcdhgc5Q91XW9 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgc5Q91XW9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgc5Q91XW9 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.25■□□□□ 0.51
Pcdhgc5Q91XW9 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgc5Q91XW9 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgc5Q91XW9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgc5Q91XW9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgc5Q91XW9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgc5Q91XW9 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgc5Q91XW9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Pcdhgc5Q91XW9 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.24■□□□□ 0.51
Pcdhgc5Q91XW9 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgc5Q91XW9 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.24■□□□□ 0.51
Pcdhgc5Q91XW9 Gm43575-201ENSMUST00000196420 516 ntBASIC18.24■□□□□ 0.51
Pcdhgc5Q91XW9 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.24■□□□□ 0.51
Pcdhgc5Q91XW9 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgc5Q91XW9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgc5Q91XW9 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgc5Q91XW9 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Pcdhgc5Q91XW9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgc5Q91XW9 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgc5Q91XW9 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgc5Q91XW9 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.23■□□□□ 0.51
Pcdhgc5Q91XW9 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.23■□□□□ 0.51
Pcdhgc5Q91XW9 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgc5Q91XW9 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgc5Q91XW9 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgc5Q91XW9 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgc5Q91XW9 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgc5Q91XW9 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgc5Q91XW9 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgc5Q91XW9 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgc5Q91XW9 Gm4995-201ENSMUST00000117247 432 ntBASIC18.23■□□□□ 0.51
Pcdhgc5Q91XW9 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.23■□□□□ 0.51
Pcdhgc5Q91XW9 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.23■□□□□ 0.51
Pcdhgc5Q91XW9 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgc5Q91XW9 AC154621.1-201ENSMUST00000226155 1119 ntBASIC18.23■□□□□ 0.51
Pcdhgc5Q91XW9 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgc5Q91XW9 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgc5Q91XW9 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgc5Q91XW9 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgc5Q91XW9 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgc5Q91XW9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgc5Q91XW9 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.23■□□□□ 0.51
Pcdhgc5Q91XW9 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgc5Q91XW9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgc5Q91XW9 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pcdhgc5Q91XW9 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgc5Q91XW9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgc5Q91XW9 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdhgc5Q91XW9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgc5Q91XW9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Pcdhgc5Q91XW9 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgc5Q91XW9 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgc5Q91XW9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgc5Q91XW9 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.22■□□□□ 0.51
Pcdhgc5Q91XW9 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgc5Q91XW9 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Pcdhgc5Q91XW9 Gm13418-201ENSMUST00000119097 944 ntBASIC18.22■□□□□ 0.51
Pcdhgc5Q91XW9 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Pcdhgc5Q91XW9 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdhgc5Q91XW9 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgc5Q91XW9 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgc5Q91XW9 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.22■□□□□ 0.51
Pcdhgc5Q91XW9 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgc5Q91XW9 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgc5Q91XW9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgc5Q91XW9 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdhgc5Q91XW9 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgc5Q91XW9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgc5Q91XW9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Pcdhgc5Q91XW9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgc5Q91XW9 AC133083.1-201ENSMUST00000221736 2209 ntBASIC18.22■□□□□ 0.51
Pcdhgc5Q91XW9 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgc5Q91XW9 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgc5Q91XW9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgc5Q91XW9 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Pcdhgc5Q91XW9 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgc5Q91XW9 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgc5Q91XW9 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Pcdhgc5Q91XW9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgc5Q91XW9 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgc5Q91XW9 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Pcdhgc5Q91XW9 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgc5Q91XW9 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgc5Q91XW9 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgc5Q91XW9 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgc5Q91XW9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgc5Q91XW9 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgc5Q91XW9 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgc5Q91XW9 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgc5Q91XW9 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgc5Q91XW9 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgc5Q91XW9 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgc5Q91XW9 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC18.21■□□□□ 0.51
Pcdhgc5Q91XW9 Gm44430-201ENSMUST00000203376 995 ntBASIC18.21■□□□□ 0.51
Pcdhgc5Q91XW9 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgc5Q91XW9 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms