Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trex1Q91XB0 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trex1Q91XB0 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trex1Q91XB0 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trex1Q91XB0 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trex1Q91XB0 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.35■□□□□ 0.53
Trex1Q91XB0 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trex1Q91XB0 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trex1Q91XB0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trex1Q91XB0 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trex1Q91XB0 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC18.34■□□□□ 0.53
Trex1Q91XB0 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trex1Q91XB0 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trex1Q91XB0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trex1Q91XB0 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trex1Q91XB0 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trex1Q91XB0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trex1Q91XB0 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.34■□□□□ 0.53
Trex1Q91XB0 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.34■□□□□ 0.53
Trex1Q91XB0 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trex1Q91XB0 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.34■□□□□ 0.53
Trex1Q91XB0 Gm43575-201ENSMUST00000196420 516 ntBASIC18.34■□□□□ 0.53
Trex1Q91XB0 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trex1Q91XB0 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trex1Q91XB0 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Trex1Q91XB0 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trex1Q91XB0 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trex1Q91XB0 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trex1Q91XB0 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trex1Q91XB0 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trex1Q91XB0 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trex1Q91XB0 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trex1Q91XB0 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trex1Q91XB0 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.33■□□□□ 0.52
Trex1Q91XB0 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.33■□□□□ 0.52
Trex1Q91XB0 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Trex1Q91XB0 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.33■□□□□ 0.52
Trex1Q91XB0 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trex1Q91XB0 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18.33■□□□□ 0.52
Trex1Q91XB0 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trex1Q91XB0 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trex1Q91XB0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Trex1Q91XB0 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.33■□□□□ 0.52
Trex1Q91XB0 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trex1Q91XB0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.33■□□□□ 0.52
Trex1Q91XB0 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Trex1Q91XB0 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trex1Q91XB0 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trex1Q91XB0 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trex1Q91XB0 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Trex1Q91XB0 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Trex1Q91XB0 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Trex1Q91XB0 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trex1Q91XB0 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Trex1Q91XB0 Gm8344-201ENSMUST00000119813 856 ntBASIC18.32■□□□□ 0.52
Trex1Q91XB0 Gm6736-201ENSMUST00000166583 948 ntBASIC18.32■□□□□ 0.52
Trex1Q91XB0 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.32■□□□□ 0.52
Trex1Q91XB0 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trex1Q91XB0 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC18.32■□□□□ 0.52
Trex1Q91XB0 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.32■□□□□ 0.52
Trex1Q91XB0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.32■□□□□ 0.52
Trex1Q91XB0 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trex1Q91XB0 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trex1Q91XB0 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC18.32■□□□□ 0.52
Trex1Q91XB0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trex1Q91XB0 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trex1Q91XB0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trex1Q91XB0 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trex1Q91XB0 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Trex1Q91XB0 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trex1Q91XB0 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trex1Q91XB0 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trex1Q91XB0 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trex1Q91XB0 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trex1Q91XB0 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trex1Q91XB0 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trex1Q91XB0 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trex1Q91XB0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trex1Q91XB0 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trex1Q91XB0 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trex1Q91XB0 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trex1Q91XB0 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trex1Q91XB0 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.31■□□□□ 0.52
Trex1Q91XB0 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.31■□□□□ 0.52
Trex1Q91XB0 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trex1Q91XB0 AC225888.1-201ENSMUST00000227184 728 ntBASIC18.31■□□□□ 0.52
Trex1Q91XB0 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trex1Q91XB0 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.31■□□□□ 0.52
Trex1Q91XB0 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trex1Q91XB0 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Trex1Q91XB0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trex1Q91XB0 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trex1Q91XB0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.31■□□□□ 0.52
Trex1Q91XB0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trex1Q91XB0 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Trex1Q91XB0 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.3■□□□□ 0.52
Trex1Q91XB0 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Trex1Q91XB0 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trex1Q91XB0 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trex1Q91XB0 Gm13216-201ENSMUST00000117145 591 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms