Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tram1Q91V04 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.85□□□□□ -0.19
Tram1Q91V04 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tram1Q91V04 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Tram1Q91V04 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tram1Q91V04 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Tram1Q91V04 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tram1Q91V04 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tram1Q91V04 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tram1Q91V04 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Tram1Q91V04 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tram1Q91V04 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC13.85□□□□□ -0.19
Tram1Q91V04 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC13.85□□□□□ -0.19
Tram1Q91V04 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC13.85□□□□□ -0.19
Tram1Q91V04 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Tram1Q91V04 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Tram1Q91V04 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tram1Q91V04 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tram1Q91V04 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Tram1Q91V04 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Tram1Q91V04 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tram1Q91V04 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tram1Q91V04 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Tram1Q91V04 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tram1Q91V04 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.84□□□□□ -0.19
Tram1Q91V04 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tram1Q91V04 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tram1Q91V04 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Tram1Q91V04 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tram1Q91V04 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tram1Q91V04 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tram1Q91V04 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tram1Q91V04 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tram1Q91V04 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.84□□□□□ -0.19
Tram1Q91V04 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tram1Q91V04 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC13.84□□□□□ -0.19
Tram1Q91V04 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tram1Q91V04 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tram1Q91V04 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tram1Q91V04 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Tram1Q91V04 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.84□□□□□ -0.19
Tram1Q91V04 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tram1Q91V04 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tram1Q91V04 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.84□□□□□ -0.19
Tram1Q91V04 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tram1Q91V04 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tram1Q91V04 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tram1Q91V04 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tram1Q91V04 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tram1Q91V04 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Tram1Q91V04 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tram1Q91V04 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Tram1Q91V04 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tram1Q91V04 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Tram1Q91V04 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Tram1Q91V04 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Tram1Q91V04 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Tram1Q91V04 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.83□□□□□ -0.2
Tram1Q91V04 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tram1Q91V04 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.83□□□□□ -0.2
Tram1Q91V04 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tram1Q91V04 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tram1Q91V04 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tram1Q91V04 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Tram1Q91V04 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tram1Q91V04 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tram1Q91V04 Gm27405-201ENSMUST00000184201 112 ntBASIC13.83□□□□□ -0.2
Tram1Q91V04 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tram1Q91V04 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tram1Q91V04 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Tram1Q91V04 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tram1Q91V04 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tram1Q91V04 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tram1Q91V04 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tram1Q91V04 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tram1Q91V04 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tram1Q91V04 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tram1Q91V04 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.83□□□□□ -0.2
Tram1Q91V04 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tram1Q91V04 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tram1Q91V04 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tram1Q91V04 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tram1Q91V04 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.82□□□□□ -0.2
Tram1Q91V04 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tram1Q91V04 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tram1Q91V04 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tram1Q91V04 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tram1Q91V04 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.82□□□□□ -0.2
Tram1Q91V04 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC13.82□□□□□ -0.2
Tram1Q91V04 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.82□□□□□ -0.2
Tram1Q91V04 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.82□□□□□ -0.2
Tram1Q91V04 Gm3807-201ENSMUST00000193520 1168 ntBASIC13.82□□□□□ -0.2
Tram1Q91V04 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC13.82□□□□□ -0.2
Tram1Q91V04 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tram1Q91V04 App-207ENSMUST00000227737 2827 ntBASIC13.82□□□□□ -0.2
Tram1Q91V04 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tram1Q91V04 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.82□□□□□ -0.2
Tram1Q91V04 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tram1Q91V04 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.82□□□□□ -0.2
Tram1Q91V04 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms