Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TraipQ8VIG6 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TraipQ8VIG6 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
TraipQ8VIG6 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TraipQ8VIG6 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TraipQ8VIG6 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TraipQ8VIG6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TraipQ8VIG6 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TraipQ8VIG6 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TraipQ8VIG6 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TraipQ8VIG6 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TraipQ8VIG6 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TraipQ8VIG6 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TraipQ8VIG6 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TraipQ8VIG6 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TraipQ8VIG6 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TraipQ8VIG6 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TraipQ8VIG6 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TraipQ8VIG6 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.01■□□□□ 0.31
TraipQ8VIG6 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.01■□□□□ 0.31
TraipQ8VIG6 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.01■□□□□ 0.31
TraipQ8VIG6 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.01■□□□□ 0.31
TraipQ8VIG6 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TraipQ8VIG6 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TraipQ8VIG6 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TraipQ8VIG6 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TraipQ8VIG6 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TraipQ8VIG6 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TraipQ8VIG6 Gm15590-201ENSMUST00000078419 552 ntBASIC17.01■□□□□ 0.31
TraipQ8VIG6 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.01■□□□□ 0.31
TraipQ8VIG6 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TraipQ8VIG6 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TraipQ8VIG6 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TraipQ8VIG6 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TraipQ8VIG6 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TraipQ8VIG6 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TraipQ8VIG6 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TraipQ8VIG6 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TraipQ8VIG6 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.01■□□□□ 0.31
TraipQ8VIG6 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.01■□□□□ 0.31
TraipQ8VIG6 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TraipQ8VIG6 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17■□□□□ 0.31
TraipQ8VIG6 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TraipQ8VIG6 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17■□□□□ 0.31
TraipQ8VIG6 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17■□□□□ 0.31
TraipQ8VIG6 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TraipQ8VIG6 Gm15358-201ENSMUST00000119249 520 ntBASIC17■□□□□ 0.31
TraipQ8VIG6 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TraipQ8VIG6 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TraipQ8VIG6 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17■□□□□ 0.31
TraipQ8VIG6 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TraipQ8VIG6 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17■□□□□ 0.31
TraipQ8VIG6 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17■□□□□ 0.31
TraipQ8VIG6 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TraipQ8VIG6 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TraipQ8VIG6 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TraipQ8VIG6 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TraipQ8VIG6 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TraipQ8VIG6 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TraipQ8VIG6 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TraipQ8VIG6 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17■□□□□ 0.31
TraipQ8VIG6 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TraipQ8VIG6 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TraipQ8VIG6 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TraipQ8VIG6 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TraipQ8VIG6 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TraipQ8VIG6 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17■□□□□ 0.31
TraipQ8VIG6 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TraipQ8VIG6 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TraipQ8VIG6 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TraipQ8VIG6 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TraipQ8VIG6 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TraipQ8VIG6 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TraipQ8VIG6 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.99■□□□□ 0.31
TraipQ8VIG6 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TraipQ8VIG6 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.99■□□□□ 0.31
TraipQ8VIG6 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TraipQ8VIG6 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.99■□□□□ 0.31
TraipQ8VIG6 Gm27628-201ENSMUST00000184911 107 ntBASIC16.99■□□□□ 0.31
TraipQ8VIG6 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.99■□□□□ 0.31
TraipQ8VIG6 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TraipQ8VIG6 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TraipQ8VIG6 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TraipQ8VIG6 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TraipQ8VIG6 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TraipQ8VIG6 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TraipQ8VIG6 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TraipQ8VIG6 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TraipQ8VIG6 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TraipQ8VIG6 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TraipQ8VIG6 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TraipQ8VIG6 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.99■□□□□ 0.31
TraipQ8VIG6 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.98■□□□□ 0.31
TraipQ8VIG6 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
TraipQ8VIG6 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TraipQ8VIG6 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TraipQ8VIG6 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TraipQ8VIG6 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TraipQ8VIG6 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TraipQ8VIG6 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms