Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Gm20760-201ENSMUST00000179197 648 ntBASIC16.21■□□□□ 0.19
Rpa1Q8VEE4 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpa1Q8VEE4 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpa1Q8VEE4 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Rpa1Q8VEE4 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpa1Q8VEE4 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rpa1Q8VEE4 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpa1Q8VEE4 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rpa1Q8VEE4 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rpa1Q8VEE4 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rpa1Q8VEE4 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rpa1Q8VEE4 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Rpa1Q8VEE4 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpa1Q8VEE4 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpa1Q8VEE4 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rpa1Q8VEE4 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rpa1Q8VEE4 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpa1Q8VEE4 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rpa1Q8VEE4 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpa1Q8VEE4 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rpa1Q8VEE4 Gm18666-201ENSMUST00000190039 958 ntBASIC16.2■□□□□ 0.18
Rpa1Q8VEE4 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpa1Q8VEE4 Gm37856-201ENSMUST00000191634 999 ntBASIC16.2■□□□□ 0.18
Rpa1Q8VEE4 Trmt13-210ENSMUST00000198454 880 ntBASIC16.2■□□□□ 0.18
Rpa1Q8VEE4 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Rpa1Q8VEE4 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Rpa1Q8VEE4 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Rpa1Q8VEE4 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Rpa1Q8VEE4 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.2■□□□□ 0.18
Rpa1Q8VEE4 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rpa1Q8VEE4 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rpa1Q8VEE4 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpa1Q8VEE4 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rpa1Q8VEE4 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpa1Q8VEE4 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpa1Q8VEE4 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rpa1Q8VEE4 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpa1Q8VEE4 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpa1Q8VEE4 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.2■□□□□ 0.18
Rpa1Q8VEE4 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.19■□□□□ 0.18
Rpa1Q8VEE4 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.19■□□□□ 0.18
Rpa1Q8VEE4 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpa1Q8VEE4 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpa1Q8VEE4 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpa1Q8VEE4 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpa1Q8VEE4 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpa1Q8VEE4 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpa1Q8VEE4 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpa1Q8VEE4 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpa1Q8VEE4 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rpa1Q8VEE4 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.19■□□□□ 0.18
Rpa1Q8VEE4 Gm12085-201ENSMUST00000119263 940 ntBASIC16.19■□□□□ 0.18
Rpa1Q8VEE4 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.19■□□□□ 0.18
Rpa1Q8VEE4 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.19■□□□□ 0.18
Rpa1Q8VEE4 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpa1Q8VEE4 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Rpa1Q8VEE4 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rpa1Q8VEE4 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Rpa1Q8VEE4 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpa1Q8VEE4 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpa1Q8VEE4 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpa1Q8VEE4 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Rpa1Q8VEE4 Actl10-202ENSMUST00000226583 1501 ntBASIC16.19■□□□□ 0.18
Rpa1Q8VEE4 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.19■□□□□ 0.18
Rpa1Q8VEE4 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpa1Q8VEE4 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rpa1Q8VEE4 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rpa1Q8VEE4 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rpa1Q8VEE4 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rpa1Q8VEE4 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rpa1Q8VEE4 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rpa1Q8VEE4 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Rpa1Q8VEE4 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rpa1Q8VEE4 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rpa1Q8VEE4 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rpa1Q8VEE4 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rpa1Q8VEE4 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rpa1Q8VEE4 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rpa1Q8VEE4 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rpa1Q8VEE4 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rpa1Q8VEE4 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.18■□□□□ 0.18
Rpa1Q8VEE4 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rpa1Q8VEE4 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.18■□□□□ 0.18
Rpa1Q8VEE4 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.18■□□□□ 0.18
Rpa1Q8VEE4 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rpa1Q8VEE4 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rpa1Q8VEE4 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rpa1Q8VEE4 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Rpa1Q8VEE4 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rpa1Q8VEE4 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.18■□□□□ 0.18
Rpa1Q8VEE4 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rpa1Q8VEE4 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rpa1Q8VEE4 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.18■□□□□ 0.18
Rpa1Q8VEE4 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rpa1Q8VEE4 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rpa1Q8VEE4 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Rpa1Q8VEE4 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rpa1Q8VEE4 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rpa1Q8VEE4 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rpa1Q8VEE4 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms