Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Nkd2Q8VE28 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Nkd2Q8VE28 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.65□□□□□ -0.06
Nkd2Q8VE28 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkd2Q8VE28 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkd2Q8VE28 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkd2Q8VE28 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.65□□□□□ -0.06
Nkd2Q8VE28 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkd2Q8VE28 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkd2Q8VE28 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkd2Q8VE28 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkd2Q8VE28 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkd2Q8VE28 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkd2Q8VE28 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.65□□□□□ -0.06
Nkd2Q8VE28 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Nkd2Q8VE28 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkd2Q8VE28 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Nkd2Q8VE28 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd2Q8VE28 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Nkd2Q8VE28 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd2Q8VE28 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Nkd2Q8VE28 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd2Q8VE28 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd2Q8VE28 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd2Q8VE28 Mzt1-203ENSMUST00000227948 952 ntBASIC14.64□□□□□ -0.07
Nkd2Q8VE28 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd2Q8VE28 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd2Q8VE28 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Nkd2Q8VE28 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd2Q8VE28 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Nkd2Q8VE28 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd2Q8VE28 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd2Q8VE28 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd2Q8VE28 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd2Q8VE28 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Nkd2Q8VE28 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Nkd2Q8VE28 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd2Q8VE28 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd2Q8VE28 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd2Q8VE28 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd2Q8VE28 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd2Q8VE28 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd2Q8VE28 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Nkd2Q8VE28 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd2Q8VE28 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkd2Q8VE28 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nkd2Q8VE28 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nkd2Q8VE28 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nkd2Q8VE28 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
Nkd2Q8VE28 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.63□□□□□ -0.07
Nkd2Q8VE28 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Nkd2Q8VE28 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nkd2Q8VE28 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkd2Q8VE28 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkd2Q8VE28 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.63□□□□□ -0.07
Nkd2Q8VE28 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nkd2Q8VE28 Gm28659-201ENSMUST00000188013 759 ntBASIC14.63□□□□□ -0.07
Nkd2Q8VE28 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkd2Q8VE28 Birc2-201ENSMUST00000054878 378 ntBASIC14.63□□□□□ -0.07
Nkd2Q8VE28 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkd2Q8VE28 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkd2Q8VE28 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Nkd2Q8VE28 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkd2Q8VE28 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkd2Q8VE28 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkd2Q8VE28 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkd2Q8VE28 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkd2Q8VE28 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Nkd2Q8VE28 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkd2Q8VE28 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkd2Q8VE28 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nkd2Q8VE28 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkd2Q8VE28 Olfr129-201ENSMUST00000122318 993 ntBASIC14.62□□□□□ -0.07
Nkd2Q8VE28 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nkd2Q8VE28 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkd2Q8VE28 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Nkd2Q8VE28 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.62□□□□□ -0.07
Nkd2Q8VE28 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.62□□□□□ -0.07
Nkd2Q8VE28 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.62□□□□□ -0.07
Nkd2Q8VE28 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkd2Q8VE28 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkd2Q8VE28 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkd2Q8VE28 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nkd2Q8VE28 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Nkd2Q8VE28 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Nkd2Q8VE28 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nkd2Q8VE28 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkd2Q8VE28 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.62□□□□□ -0.07
Nkd2Q8VE28 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkd2Q8VE28 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkd2Q8VE28 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkd2Q8VE28 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Nkd2Q8VE28 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkd2Q8VE28 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Nkd2Q8VE28 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkd2Q8VE28 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkd2Q8VE28 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkd2Q8VE28 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkd2Q8VE28 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Nkd2Q8VE28 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms