Protein–RNA interactions for Protein: Q8VCZ8

Rpusd1, RNA pseudouridylate synthase domain-containing protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd1Q8VCZ8 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.26■□□□□ 0.03
Rpusd1Q8VCZ8 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Rpusd1Q8VCZ8 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpusd1Q8VCZ8 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rpusd1Q8VCZ8 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rpusd1Q8VCZ8 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Rpusd1Q8VCZ8 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpusd1Q8VCZ8 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rpusd1Q8VCZ8 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpusd1Q8VCZ8 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpusd1Q8VCZ8 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rpusd1Q8VCZ8 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpusd1Q8VCZ8 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpusd1Q8VCZ8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.25■□□□□ 0.03
Rpusd1Q8VCZ8 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Rpusd1Q8VCZ8 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpusd1Q8VCZ8 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpusd1Q8VCZ8 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpusd1Q8VCZ8 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpusd1Q8VCZ8 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.25■□□□□ 0.03
Rpusd1Q8VCZ8 Gm8344-201ENSMUST00000119813 856 ntBASIC15.25■□□□□ 0.03
Rpusd1Q8VCZ8 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.25■□□□□ 0.03
Rpusd1Q8VCZ8 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.25■□□□□ 0.03
Rpusd1Q8VCZ8 Gm5682-201ENSMUST00000173402 505 ntBASIC15.25■□□□□ 0.03
Rpusd1Q8VCZ8 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.25■□□□□ 0.03
Rpusd1Q8VCZ8 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rpusd1Q8VCZ8 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.25■□□□□ 0.03
Rpusd1Q8VCZ8 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpusd1Q8VCZ8 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Rpusd1Q8VCZ8 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Rpusd1Q8VCZ8 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpusd1Q8VCZ8 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpusd1Q8VCZ8 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rpusd1Q8VCZ8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Rpusd1Q8VCZ8 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rpusd1Q8VCZ8 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpusd1Q8VCZ8 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rpusd1Q8VCZ8 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rpusd1Q8VCZ8 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rpusd1Q8VCZ8 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rpusd1Q8VCZ8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpusd1Q8VCZ8 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rpusd1Q8VCZ8 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rpusd1Q8VCZ8 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpusd1Q8VCZ8 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpusd1Q8VCZ8 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Rpusd1Q8VCZ8 Gm6257-201ENSMUST00000163864 910 ntBASIC15.24■□□□□ 0.03
Rpusd1Q8VCZ8 Gm27702-201ENSMUST00000184512 56 ntBASIC15.24■□□□□ 0.03
Rpusd1Q8VCZ8 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpusd1Q8VCZ8 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpusd1Q8VCZ8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpusd1Q8VCZ8 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpusd1Q8VCZ8 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Rpusd1Q8VCZ8 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpusd1Q8VCZ8 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpusd1Q8VCZ8 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.24■□□□□ 0.03
Rpusd1Q8VCZ8 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rpusd1Q8VCZ8 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rpusd1Q8VCZ8 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rpusd1Q8VCZ8 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpusd1Q8VCZ8 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rpusd1Q8VCZ8 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpusd1Q8VCZ8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Rpusd1Q8VCZ8 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpusd1Q8VCZ8 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rpusd1Q8VCZ8 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Rpusd1Q8VCZ8 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.23■□□□□ 0.03
Rpusd1Q8VCZ8 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpusd1Q8VCZ8 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpusd1Q8VCZ8 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpusd1Q8VCZ8 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.23■□□□□ 0.03
Rpusd1Q8VCZ8 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.23■□□□□ 0.03
Rpusd1Q8VCZ8 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.23■□□□□ 0.03
Rpusd1Q8VCZ8 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rpusd1Q8VCZ8 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.23■□□□□ 0.03
Rpusd1Q8VCZ8 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.23■□□□□ 0.03
Rpusd1Q8VCZ8 Gm2756-201ENSMUST00000195851 400 ntBASIC15.23■□□□□ 0.03
Rpusd1Q8VCZ8 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rpusd1Q8VCZ8 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpusd1Q8VCZ8 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpusd1Q8VCZ8 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpusd1Q8VCZ8 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rpusd1Q8VCZ8 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpusd1Q8VCZ8 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rpusd1Q8VCZ8 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rpusd1Q8VCZ8 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpusd1Q8VCZ8 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Rpusd1Q8VCZ8 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Rpusd1Q8VCZ8 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpusd1Q8VCZ8 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rpusd1Q8VCZ8 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpusd1Q8VCZ8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpusd1Q8VCZ8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpusd1Q8VCZ8 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpusd1Q8VCZ8 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpusd1Q8VCZ8 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpusd1Q8VCZ8 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpusd1Q8VCZ8 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rpusd1Q8VCZ8 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpusd1Q8VCZ8 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 927.5 ms