Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ndc1Q8VCB1 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ndc1Q8VCB1 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ndc1Q8VCB1 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ndc1Q8VCB1 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ndc1Q8VCB1 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ndc1Q8VCB1 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.12■□□□□ 0.01
Ndc1Q8VCB1 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ndc1Q8VCB1 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ndc1Q8VCB1 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ndc1Q8VCB1 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ndc1Q8VCB1 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ndc1Q8VCB1 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ndc1Q8VCB1 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ndc1Q8VCB1 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.12■□□□□ 0.01
Ndc1Q8VCB1 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Ndc1Q8VCB1 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.12■□□□□ 0.01
Ndc1Q8VCB1 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ndc1Q8VCB1 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ndc1Q8VCB1 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ndc1Q8VCB1 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ndc1Q8VCB1 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ndc1Q8VCB1 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ndc1Q8VCB1 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ndc1Q8VCB1 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ndc1Q8VCB1 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ndc1Q8VCB1 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ndc1Q8VCB1 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ndc1Q8VCB1 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ndc1Q8VCB1 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ndc1Q8VCB1 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ndc1Q8VCB1 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ndc1Q8VCB1 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ndc1Q8VCB1 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ndc1Q8VCB1 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ndc1Q8VCB1 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ndc1Q8VCB1 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ndc1Q8VCB1 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ndc1Q8VCB1 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.11■□□□□ 0.01
Ndc1Q8VCB1 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.11■□□□□ 0.01
Ndc1Q8VCB1 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.11■□□□□ 0.01
Ndc1Q8VCB1 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ndc1Q8VCB1 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.11■□□□□ 0.01
Ndc1Q8VCB1 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.11■□□□□ 0.01
Ndc1Q8VCB1 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Ndc1Q8VCB1 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.11■□□□□ 0.01
Ndc1Q8VCB1 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ndc1Q8VCB1 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ndc1Q8VCB1 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Ndc1Q8VCB1 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ndc1Q8VCB1 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ndc1Q8VCB1 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ndc1Q8VCB1 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ndc1Q8VCB1 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ndc1Q8VCB1 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ndc1Q8VCB1 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ndc1Q8VCB1 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ndc1Q8VCB1 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ndc1Q8VCB1 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndc1Q8VCB1 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndc1Q8VCB1 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ndc1Q8VCB1 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ndc1Q8VCB1 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndc1Q8VCB1 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndc1Q8VCB1 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndc1Q8VCB1 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ndc1Q8VCB1 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndc1Q8VCB1 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndc1Q8VCB1 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.1■□□□□ 0.01
Ndc1Q8VCB1 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndc1Q8VCB1 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ndc1Q8VCB1 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndc1Q8VCB1 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndc1Q8VCB1 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ndc1Q8VCB1 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndc1Q8VCB1 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndc1Q8VCB1 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndc1Q8VCB1 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndc1Q8VCB1 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndc1Q8VCB1 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndc1Q8VCB1 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndc1Q8VCB1 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ndc1Q8VCB1 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndc1Q8VCB1 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndc1Q8VCB1 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndc1Q8VCB1 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.09■□□□□ 0.01
Ndc1Q8VCB1 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndc1Q8VCB1 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndc1Q8VCB1 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndc1Q8VCB1 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.09■□□□□ 0.01
Ndc1Q8VCB1 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.09■□□□□ 0.01
Ndc1Q8VCB1 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndc1Q8VCB1 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ndc1Q8VCB1 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.09■□□□□ 0.01
Ndc1Q8VCB1 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndc1Q8VCB1 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndc1Q8VCB1 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.09■□□□□ 0.01
Ndc1Q8VCB1 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ndc1Q8VCB1 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndc1Q8VCB1 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms