Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Cdt1Q8R4E9 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdt1Q8R4E9 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.53■□□□□ 0.08
Cdt1Q8R4E9 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Cdt1Q8R4E9 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.53■□□□□ 0.08
Cdt1Q8R4E9 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.53■□□□□ 0.08
Cdt1Q8R4E9 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdt1Q8R4E9 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.53■□□□□ 0.08
Cdt1Q8R4E9 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.53■□□□□ 0.08
Cdt1Q8R4E9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdt1Q8R4E9 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.53■□□□□ 0.08
Cdt1Q8R4E9 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdt1Q8R4E9 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cdt1Q8R4E9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Cdt1Q8R4E9 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Cdt1Q8R4E9 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdt1Q8R4E9 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdt1Q8R4E9 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.52■□□□□ 0.08
Cdt1Q8R4E9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdt1Q8R4E9 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.08
Cdt1Q8R4E9 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cdt1Q8R4E9 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.52■□□□□ 0.08
Cdt1Q8R4E9 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.52■□□□□ 0.08
Cdt1Q8R4E9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.52■□□□□ 0.08
Cdt1Q8R4E9 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdt1Q8R4E9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdt1Q8R4E9 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdt1Q8R4E9 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdt1Q8R4E9 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdt1Q8R4E9 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Cdt1Q8R4E9 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdt1Q8R4E9 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdt1Q8R4E9 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Cdt1Q8R4E9 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdt1Q8R4E9 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Cdt1Q8R4E9 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdt1Q8R4E9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Cdt1Q8R4E9 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cdt1Q8R4E9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdt1Q8R4E9 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.51■□□□□ 0.07
Cdt1Q8R4E9 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Cdt1Q8R4E9 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cdt1Q8R4E9 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdt1Q8R4E9 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Cdt1Q8R4E9 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Cdt1Q8R4E9 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cdt1Q8R4E9 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdt1Q8R4E9 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdt1Q8R4E9 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdt1Q8R4E9 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdt1Q8R4E9 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdt1Q8R4E9 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.51■□□□□ 0.07
Cdt1Q8R4E9 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdt1Q8R4E9 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdt1Q8R4E9 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Cdt1Q8R4E9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cdt1Q8R4E9 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Cdt1Q8R4E9 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.51■□□□□ 0.07
Cdt1Q8R4E9 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Cdt1Q8R4E9 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdt1Q8R4E9 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdt1Q8R4E9 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdt1Q8R4E9 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdt1Q8R4E9 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdt1Q8R4E9 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdt1Q8R4E9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdt1Q8R4E9 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdt1Q8R4E9 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cdt1Q8R4E9 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdt1Q8R4E9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdt1Q8R4E9 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdt1Q8R4E9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdt1Q8R4E9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdt1Q8R4E9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdt1Q8R4E9 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Cdt1Q8R4E9 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdt1Q8R4E9 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdt1Q8R4E9 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdt1Q8R4E9 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdt1Q8R4E9 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdt1Q8R4E9 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
Cdt1Q8R4E9 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.5■□□□□ 0.07
Cdt1Q8R4E9 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdt1Q8R4E9 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.5■□□□□ 0.07
Cdt1Q8R4E9 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cdt1Q8R4E9 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.5■□□□□ 0.07
Cdt1Q8R4E9 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdt1Q8R4E9 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdt1Q8R4E9 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cdt1Q8R4E9 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cdt1Q8R4E9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdt1Q8R4E9 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdt1Q8R4E9 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdt1Q8R4E9 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cdt1Q8R4E9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdt1Q8R4E9 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdt1Q8R4E9 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdt1Q8R4E9 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdt1Q8R4E9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdt1Q8R4E9 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms