Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacnb1Q8R3Z5 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.2■□□□□ 0.5
Cacnb1Q8R3Z5 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacnb1Q8R3Z5 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacnb1Q8R3Z5 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacnb1Q8R3Z5 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cacnb1Q8R3Z5 Cgrrf1-203ENSMUST00000133989 873 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cacnb1Q8R3Z5 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.2■□□□□ 0.5
Cacnb1Q8R3Z5 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cacnb1Q8R3Z5 Gm29747-201ENSMUST00000194764 585 ntBASIC18.2■□□□□ 0.5
Cacnb1Q8R3Z5 Gm8679-201ENSMUST00000210651 1036 ntBASIC18.2■□□□□ 0.5
Cacnb1Q8R3Z5 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.2■□□□□ 0.5
Cacnb1Q8R3Z5 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cacnb1Q8R3Z5 CT025579.2-201ENSMUST00000225280 816 ntBASIC18.2■□□□□ 0.5
Cacnb1Q8R3Z5 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacnb1Q8R3Z5 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Cacnb1Q8R3Z5 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacnb1Q8R3Z5 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacnb1Q8R3Z5 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cacnb1Q8R3Z5 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacnb1Q8R3Z5 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacnb1Q8R3Z5 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Cacnb1Q8R3Z5 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacnb1Q8R3Z5 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.2■□□□□ 0.5
Cacnb1Q8R3Z5 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cacnb1Q8R3Z5 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Cacnb1Q8R3Z5 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacnb1Q8R3Z5 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacnb1Q8R3Z5 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacnb1Q8R3Z5 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cacnb1Q8R3Z5 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Cacnb1Q8R3Z5 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.19■□□□□ 0.5
Cacnb1Q8R3Z5 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cacnb1Q8R3Z5 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
Cacnb1Q8R3Z5 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cacnb1Q8R3Z5 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
Cacnb1Q8R3Z5 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cacnb1Q8R3Z5 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cacnb1Q8R3Z5 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.19■□□□□ 0.5
Cacnb1Q8R3Z5 Gm37858-201ENSMUST00000192759 1231 ntBASIC18.19■□□□□ 0.5
Cacnb1Q8R3Z5 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cacnb1Q8R3Z5 Gm5587-201ENSMUST00000206270 674 ntBASIC18.19■□□□□ 0.5
Cacnb1Q8R3Z5 Gm39375-201ENSMUST00000217068 1039 ntTSL 5 BASIC18.19■□□□□ 0.5
Cacnb1Q8R3Z5 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cacnb1Q8R3Z5 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cacnb1Q8R3Z5 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Cacnb1Q8R3Z5 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Cacnb1Q8R3Z5 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cacnb1Q8R3Z5 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.19■□□□□ 0.5
Cacnb1Q8R3Z5 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Cacnb1Q8R3Z5 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cacnb1Q8R3Z5 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cacnb1Q8R3Z5 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Cacnb1Q8R3Z5 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cacnb1Q8R3Z5 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacnb1Q8R3Z5 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cacnb1Q8R3Z5 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacnb1Q8R3Z5 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cacnb1Q8R3Z5 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacnb1Q8R3Z5 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacnb1Q8R3Z5 Haglr-201ENSMUST00000100000 2085 ntBASIC18.18■□□□□ 0.5
Cacnb1Q8R3Z5 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacnb1Q8R3Z5 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacnb1Q8R3Z5 Gm11411-201ENSMUST00000117951 719 ntBASIC18.18■□□□□ 0.5
Cacnb1Q8R3Z5 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC18.18■□□□□ 0.5
Cacnb1Q8R3Z5 Gm8988-201ENSMUST00000155015 1240 ntBASIC18.18■□□□□ 0.5
Cacnb1Q8R3Z5 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Cacnb1Q8R3Z5 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Cacnb1Q8R3Z5 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.18■□□□□ 0.5
Cacnb1Q8R3Z5 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cacnb1Q8R3Z5 Gm7977-201ENSMUST00000193787 748 ntBASIC18.18■□□□□ 0.5
Cacnb1Q8R3Z5 Gm29707-201ENSMUST00000196325 491 ntBASIC18.18■□□□□ 0.5
Cacnb1Q8R3Z5 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cacnb1Q8R3Z5 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.18■□□□□ 0.5
Cacnb1Q8R3Z5 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacnb1Q8R3Z5 Gm6653-201ENSMUST00000218063 1288 ntBASIC18.18■□□□□ 0.5
Cacnb1Q8R3Z5 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.18■□□□□ 0.5
Cacnb1Q8R3Z5 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacnb1Q8R3Z5 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Cacnb1Q8R3Z5 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cacnb1Q8R3Z5 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cacnb1Q8R3Z5 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacnb1Q8R3Z5 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacnb1Q8R3Z5 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cacnb1Q8R3Z5 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.18■□□□□ 0.5
Cacnb1Q8R3Z5 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacnb1Q8R3Z5 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.18■□□□□ 0.5
Cacnb1Q8R3Z5 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.18■□□□□ 0.5
Cacnb1Q8R3Z5 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cacnb1Q8R3Z5 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Cacnb1Q8R3Z5 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cacnb1Q8R3Z5 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cacnb1Q8R3Z5 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cacnb1Q8R3Z5 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cacnb1Q8R3Z5 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.17■□□□□ 0.5
Cacnb1Q8R3Z5 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cacnb1Q8R3Z5 Gm9013-201ENSMUST00000132939 882 ntBASIC18.17■□□□□ 0.5
Cacnb1Q8R3Z5 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.17■□□□□ 0.5
Cacnb1Q8R3Z5 Gm8624-202ENSMUST00000165677 669 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cacnb1Q8R3Z5 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms