Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc58Q8R3Q6 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc58Q8R3Q6 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc58Q8R3Q6 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc58Q8R3Q6 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc58Q8R3Q6 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc58Q8R3Q6 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.43□□□□□ -0.1
Ccdc58Q8R3Q6 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc58Q8R3Q6 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.43□□□□□ -0.1
Ccdc58Q8R3Q6 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc58Q8R3Q6 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ccdc58Q8R3Q6 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc58Q8R3Q6 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc58Q8R3Q6 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.42□□□□□ -0.1
Ccdc58Q8R3Q6 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ccdc58Q8R3Q6 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc58Q8R3Q6 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc58Q8R3Q6 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc58Q8R3Q6 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc58Q8R3Q6 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.42□□□□□ -0.1
Ccdc58Q8R3Q6 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc58Q8R3Q6 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc58Q8R3Q6 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc58Q8R3Q6 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc58Q8R3Q6 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc58Q8R3Q6 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc58Q8R3Q6 Gm18958-201ENSMUST00000174258 762 ntBASIC14.42□□□□□ -0.1
Ccdc58Q8R3Q6 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ccdc58Q8R3Q6 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ccdc58Q8R3Q6 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc58Q8R3Q6 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc58Q8R3Q6 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc58Q8R3Q6 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc58Q8R3Q6 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc58Q8R3Q6 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc58Q8R3Q6 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc58Q8R3Q6 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc58Q8R3Q6 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc58Q8R3Q6 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc58Q8R3Q6 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc58Q8R3Q6 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc58Q8R3Q6 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc58Q8R3Q6 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ccdc58Q8R3Q6 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc58Q8R3Q6 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc58Q8R3Q6 Gm15378-201ENSMUST00000121894 207 ntBASIC14.41□□□□□ -0.1
Ccdc58Q8R3Q6 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.41□□□□□ -0.1
Ccdc58Q8R3Q6 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.41□□□□□ -0.1
Ccdc58Q8R3Q6 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc58Q8R3Q6 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc58Q8R3Q6 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc58Q8R3Q6 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.41□□□□□ -0.1
Ccdc58Q8R3Q6 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc58Q8R3Q6 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc58Q8R3Q6 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc58Q8R3Q6 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc58Q8R3Q6 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc58Q8R3Q6 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc58Q8R3Q6 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc58Q8R3Q6 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc58Q8R3Q6 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc58Q8R3Q6 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc58Q8R3Q6 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc58Q8R3Q6 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc58Q8R3Q6 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc58Q8R3Q6 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc58Q8R3Q6 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc58Q8R3Q6 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc58Q8R3Q6 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc58Q8R3Q6 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc58Q8R3Q6 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc58Q8R3Q6 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.4□□□□□ -0.1
Ccdc58Q8R3Q6 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc58Q8R3Q6 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc58Q8R3Q6 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.4□□□□□ -0.1
Ccdc58Q8R3Q6 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Ccdc58Q8R3Q6 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc58Q8R3Q6 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc58Q8R3Q6 Gm38027-201ENSMUST00000192315 235 ntBASIC14.4□□□□□ -0.1
Ccdc58Q8R3Q6 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc58Q8R3Q6 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc58Q8R3Q6 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc58Q8R3Q6 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc58Q8R3Q6 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc58Q8R3Q6 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc58Q8R3Q6 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ccdc58Q8R3Q6 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ccdc58Q8R3Q6 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc58Q8R3Q6 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc58Q8R3Q6 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc58Q8R3Q6 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc58Q8R3Q6 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.39□□□□□ -0.11
Ccdc58Q8R3Q6 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc58Q8R3Q6 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc58Q8R3Q6 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.39□□□□□ -0.11
Ccdc58Q8R3Q6 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc58Q8R3Q6 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.39□□□□□ -0.11
Ccdc58Q8R3Q6 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc58Q8R3Q6 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc58Q8R3Q6 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms