Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Zcchc9Q8R1J3 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Zcchc9Q8R1J3 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Zcchc9Q8R1J3 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Zcchc9Q8R1J3 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Zcchc9Q8R1J3 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Zcchc9Q8R1J3 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Zcchc9Q8R1J3 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.99■□□□□ 0.15
Zcchc9Q8R1J3 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Zcchc9Q8R1J3 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Zcchc9Q8R1J3 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Zcchc9Q8R1J3 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.99■□□□□ 0.15
Zcchc9Q8R1J3 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.99■□□□□ 0.15
Zcchc9Q8R1J3 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.99■□□□□ 0.15
Zcchc9Q8R1J3 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Zcchc9Q8R1J3 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.99■□□□□ 0.15
Zcchc9Q8R1J3 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Zcchc9Q8R1J3 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Zcchc9Q8R1J3 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Zcchc9Q8R1J3 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Zcchc9Q8R1J3 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Zcchc9Q8R1J3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Zcchc9Q8R1J3 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Zcchc9Q8R1J3 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Zcchc9Q8R1J3 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Zcchc9Q8R1J3 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Zcchc9Q8R1J3 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Zcchc9Q8R1J3 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Zcchc9Q8R1J3 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Zcchc9Q8R1J3 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Zcchc9Q8R1J3 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Zcchc9Q8R1J3 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Zcchc9Q8R1J3 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Zcchc9Q8R1J3 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Zcchc9Q8R1J3 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Zcchc9Q8R1J3 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Zcchc9Q8R1J3 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.98■□□□□ 0.15
Zcchc9Q8R1J3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Zcchc9Q8R1J3 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Zcchc9Q8R1J3 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.98■□□□□ 0.15
Zcchc9Q8R1J3 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.98■□□□□ 0.15
Zcchc9Q8R1J3 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.98■□□□□ 0.15
Zcchc9Q8R1J3 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.98■□□□□ 0.15
Zcchc9Q8R1J3 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Zcchc9Q8R1J3 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Zcchc9Q8R1J3 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Zcchc9Q8R1J3 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Zcchc9Q8R1J3 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Zcchc9Q8R1J3 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Zcchc9Q8R1J3 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Zcchc9Q8R1J3 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.98■□□□□ 0.15
Zcchc9Q8R1J3 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Zcchc9Q8R1J3 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Zcchc9Q8R1J3 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Zcchc9Q8R1J3 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Zcchc9Q8R1J3 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Zcchc9Q8R1J3 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Zcchc9Q8R1J3 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Zcchc9Q8R1J3 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Zcchc9Q8R1J3 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Zcchc9Q8R1J3 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.97■□□□□ 0.15
Zcchc9Q8R1J3 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.97■□□□□ 0.15
Zcchc9Q8R1J3 Gm12350-201ENSMUST00000121208 462 ntBASIC15.97■□□□□ 0.15
Zcchc9Q8R1J3 Gm11594-201ENSMUST00000122313 162 ntBASIC15.97■□□□□ 0.15
Zcchc9Q8R1J3 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Zcchc9Q8R1J3 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Zcchc9Q8R1J3 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.97■□□□□ 0.15
Zcchc9Q8R1J3 Gm25745-201ENSMUST00000174945 133 ntBASIC15.97■□□□□ 0.15
Zcchc9Q8R1J3 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.97■□□□□ 0.15
Zcchc9Q8R1J3 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Zcchc9Q8R1J3 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Zcchc9Q8R1J3 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Zcchc9Q8R1J3 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Zcchc9Q8R1J3 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.97■□□□□ 0.15
Zcchc9Q8R1J3 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Zcchc9Q8R1J3 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.97■□□□□ 0.15
Zcchc9Q8R1J3 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Zcchc9Q8R1J3 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Zcchc9Q8R1J3 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.97■□□□□ 0.15
Zcchc9Q8R1J3 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Zcchc9Q8R1J3 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.97■□□□□ 0.15
Zcchc9Q8R1J3 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.97■□□□□ 0.15
Zcchc9Q8R1J3 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Zcchc9Q8R1J3 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Zcchc9Q8R1J3 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Zcchc9Q8R1J3 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Zcchc9Q8R1J3 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Zcchc9Q8R1J3 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Zcchc9Q8R1J3 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Zcchc9Q8R1J3 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Zcchc9Q8R1J3 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Zcchc9Q8R1J3 Gm8000-201ENSMUST00000188378 592 ntBASIC15.96■□□□□ 0.15
Zcchc9Q8R1J3 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.96■□□□□ 0.15
Zcchc9Q8R1J3 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Zcchc9Q8R1J3 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.96■□□□□ 0.15
Zcchc9Q8R1J3 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Zcchc9Q8R1J3 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Zcchc9Q8R1J3 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Zcchc9Q8R1J3 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Zcchc9Q8R1J3 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms