Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pdlim2Q8R1G6 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pdlim2Q8R1G6 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Pdlim2Q8R1G6 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.45■□□□□ 0.54
Pdlim2Q8R1G6 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
Pdlim2Q8R1G6 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pdlim2Q8R1G6 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Pdlim2Q8R1G6 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pdlim2Q8R1G6 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pdlim2Q8R1G6 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pdlim2Q8R1G6 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pdlim2Q8R1G6 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pdlim2Q8R1G6 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pdlim2Q8R1G6 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Pdlim2Q8R1G6 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.45■□□□□ 0.54
Pdlim2Q8R1G6 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.45■□□□□ 0.54
Pdlim2Q8R1G6 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Pdlim2Q8R1G6 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim2Q8R1G6 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim2Q8R1G6 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim2Q8R1G6 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim2Q8R1G6 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC18.44■□□□□ 0.54
Pdlim2Q8R1G6 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim2Q8R1G6 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Pdlim2Q8R1G6 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Pdlim2Q8R1G6 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim2Q8R1G6 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim2Q8R1G6 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
Pdlim2Q8R1G6 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim2Q8R1G6 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim2Q8R1G6 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim2Q8R1G6 CT030684.3-201ENSMUST00000227308 2445 ntBASIC18.44■□□□□ 0.54
Pdlim2Q8R1G6 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim2Q8R1G6 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim2Q8R1G6 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim2Q8R1G6 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim2Q8R1G6 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
Pdlim2Q8R1G6 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim2Q8R1G6 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim2Q8R1G6 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim2Q8R1G6 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim2Q8R1G6 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim2Q8R1G6 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim2Q8R1G6 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim2Q8R1G6 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdlim2Q8R1G6 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdlim2Q8R1G6 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdlim2Q8R1G6 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Pdlim2Q8R1G6 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC18.43■□□□□ 0.54
Pdlim2Q8R1G6 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdlim2Q8R1G6 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdlim2Q8R1G6 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pdlim2Q8R1G6 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdlim2Q8R1G6 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdlim2Q8R1G6 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Pdlim2Q8R1G6 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pdlim2Q8R1G6 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pdlim2Q8R1G6 Gm29257-201ENSMUST00000186115 639 ntBASIC18.43■□□□□ 0.54
Pdlim2Q8R1G6 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.43■□□□□ 0.54
Pdlim2Q8R1G6 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.43■□□□□ 0.54
Pdlim2Q8R1G6 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdlim2Q8R1G6 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdlim2Q8R1G6 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdlim2Q8R1G6 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.43■□□□□ 0.54
Pdlim2Q8R1G6 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdlim2Q8R1G6 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdlim2Q8R1G6 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim2Q8R1G6 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Pdlim2Q8R1G6 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim2Q8R1G6 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim2Q8R1G6 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim2Q8R1G6 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.42■□□□□ 0.54
Pdlim2Q8R1G6 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Pdlim2Q8R1G6 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim2Q8R1G6 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim2Q8R1G6 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Pdlim2Q8R1G6 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim2Q8R1G6 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim2Q8R1G6 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim2Q8R1G6 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim2Q8R1G6 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim2Q8R1G6 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim2Q8R1G6 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim2Q8R1G6 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim2Q8R1G6 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Pdlim2Q8R1G6 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim2Q8R1G6 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim2Q8R1G6 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim2Q8R1G6 Gm10605-202ENSMUST00000183019 3198 ntBASIC18.41■□□□□ 0.54
Pdlim2Q8R1G6 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim2Q8R1G6 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim2Q8R1G6 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pdlim2Q8R1G6 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.41■□□□□ 0.54
Pdlim2Q8R1G6 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim2Q8R1G6 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.41■□□□□ 0.54
Pdlim2Q8R1G6 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim2Q8R1G6 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim2Q8R1G6 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC18.41■□□□□ 0.54
Pdlim2Q8R1G6 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim2Q8R1G6 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms